RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1214993 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6708062 6708062 PRJNA1214993_P_NODE_12786_length_309_cov_0.877119_g12600_i0 PRJNA1214993 12786 309 0.877119 2.71029771 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.029   NTclustered gi|2806474035|ref|XM_068494155.1| 1144522 g12600 i0 100 0.0906148867313916 28 0 9 0 99 126 684 711 Tritrichomonas foetus uncharacterized protein (TRFO_08210), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19456397 19456397 PRJNA1214993_P_NODE_22836_length_247_cov_1.172414_g22650_i0 PRJNA1214993 22836 247 1.172414 2.89586258 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.006   NTclustered gi|2806448246|ref|XM_068499511.1| 1144522 g22650 i0 96.97 0.246963562753036 33 0 13 1 195 227 8793 8762 Tritrichomonas foetus Dynein heavy chain family protein (TRFO_17307), partial mRNA blastn 61 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;