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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1214993 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
330289 330289 PRJNA1214993_P_NODE_21501_length_249_cov_2.835227_g21315_i0 PRJNA1214993 21501 249 2.835227 7.05971523 Platyamoeba placida 3454475 Discosea other_Eukaryota 344 3.32e-90   NTclustered gi|33946348|gb|AY294153.1| 197527 g21315 i0 91.566 97.9518072289157 249 21 100 0 1 249 887 639 Platyamoeba placida actin mRNA, partial cds blastn 24390 344 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
2881211 2881211 PRJNA1214993_P_NODE_17903_length_265_cov_1.046875_g17717_i0 PRJNA1214993 17903 265 1.046875 2.77421875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 1.03e-65   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g17717 i0 84.962 21.9584905660377 266 32 99 6 4 265 2153 1892 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 5819 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5433599 5433599 PRJNA1214993_P_NODE_8465_length_373_cov_5.343333_g8279_i0 PRJNA1214993 8465 373 5.343333 19.93063209 Ripella tribonemae 2047823 Discosea other_Eukaryota 614 3.6099999999999997e-171   NTclustered gi|1269228443|gb|MF683568.1| 2047823 g8279 i0 97.253 94.3378016085791 364 6 97 4 1 362 1036 675 Ripella tribonemae clone 70.1.3 18S ribosomal RNA gene, partial sequence blastn 35188 614 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
6708165 6708165 PRJNA1214993_P_NODE_26626_length_231_cov_2.025316_g26440_i0 PRJNA1214993 26626 231 2.025316 4.67847996 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 291 4.02e-74   NTclustered gi|575488798|gb|KF772979.1| 180228 g26440 i0 90.455 100.17316017316 220 21 95 0 1 220 498 717 Paramoeba pemaquidensis strain PA027 beta actin mRNA, partial cds blastn 23140 291 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
7983704 7983704 PRJNA1214993_P_NODE_1647_length_805_cov_3.607923_g1487_i0 PRJNA1214993 1647 805 3.607923 29.04378015 Ripella sp. 1973050 Discosea other_Eukaryota 473 1.4599999999999998e-128   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g1487 i0 82.982 61.0832298136646 570 51 67 25 268 805 3 558 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 49172 473 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
11248699 11248699 PRJNA1214993_P_NODE_18329_length_261_cov_3.255319_g18143_i0 PRJNA1214993 18329 261 3.255319 8.49638259 Ripella 1217112 Discosea other_Eukaryota 446 9.339999999999999e-121   NTclustered gi|399764203|gb|JQ271714.1| 1217114 g18143 i0 97.338 100.850574712644 263 5 100 2 1 261 1322 1584 Ripella sp. DP13 18S ribosomal RNA gene, partial sequence blastn 26322 446 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. DP13
11248719 11248719 PRJNA1214993_P_NODE_3189_length_592_cov_2.057803_g3008_i0 PRJNA1214993 3189 592 2.057803 12.18219376 Vannellidae 95227 Discosea other_Eukaryota 435 4.98e-117   NTclustered gi|62865947|gb|AY929922.1| 325065 g3008 i0 80.467 102.045608108108 599 91 100 19 1 592 1092 1671 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 60411 435 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
16907537 16907537 PRJNA1214993_P_NODE_574_length_1247_cov_6.677172_g487_i0 PRJNA1214993 574 1247 6.677172 83.26433484 Paramoeba branchiphila 308475 Discosea other_Eukaryota 754 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g487 i0 78.59 53.8388131515638 1149 238 92 7 1 1145 56 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 67137 754 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
18181935 18181935 PRJNA1214993_P_NODE_4935_length_480_cov_4.174447_g4750_i0 PRJNA1214993 4935 480 4.174447 20.0373456 Ripella sp. 805 1217113 Discosea other_Eukaryota 712 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g4750 i0 93.173 102.216666666667 498 13 100 9 1 480 4 498 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 49064 712 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
20731823 20731823 PRJNA1214993_P_NODE_4897_length_482_cov_2.158924_g4712_i0 PRJNA1214993 4897 482 2.158924 10.40601368 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 298 5.46e-76   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4712 i0 78.407 4.94813278008299 477 90 98 11 10 481 2520 2052 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 2385 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;