RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1214993 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5433447 5433447 PRJNA1214993_P_NODE_13565_length_300_cov_1.017621_g13379_i0 PRJNA1214993 13565 300 1.017621 3.052863 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 555 1.7399999999999995e-153   NTclustered gi|2729058829|ref|XR_010517322.1| 499914 g13379 i0 100 9.66666666666667 300 0 100 0 1 300 403 702 PREDICTED: Rhopilema esculentum large subunit ribosomal RNA (LOC135695981), rRNA blastn 2900 555 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
5433550 5433550 PRJNA1214993_P_NODE_4185_length_520_cov_1.550336_g4000_i0 PRJNA1214993 4185 520 1.550336 8.0617472 Calycella syringa 314529 Cnidaria other_Eukaryota 259 2.8e-64   NTclustered gi|62825485|gb|AY789879.1| 314529 g4000 i0 86.441 48.5115384615385 236 32 45 0 282 517 1 236 Calycella syringa voucher 664MA calmodulin gene, partial cds blastn 25226 259 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Calycella Calycella syringa
15633199 15633199 PRJNA1214993_P_NODE_20073_length_252_cov_0.871508_g19887_i0 PRJNA1214993 20073 252 0.871508 2.19620016 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 202 2.14e-47   NTclustered gi|2519002257|ref|XM_057452733.1| 13093 g19887 i0 85.075 39.2222222222222 201 26 79 4 3 201 210 408 PREDICTED: Hydractinia symbiolongicarpus T-complex protein 1 subunit alpha-like (LOC130647023), mRNA blastn 9884 202 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
22007087 22007087 PRJNA1214993_P_NODE_18058_length_263_cov_2.573684_g17872_i0 PRJNA1214993 18058 263 2.573684 6.76878892 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 102 2.35e-17   NTclustered gi|2519015635|ref|XM_057459180.1| 13093 g17872 i0 76.263 1.50570342205323 198 43 75 4 7 202 469 664 PREDICTED: Hydractinia symbiolongicarpus mRNA decay activator protein ZFP36L2-B-like (LOC130656346), transcript variant X1, mRNA blastn 396 102 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
23282505 23282505 PRJNA1214993_P_NODE_24999_length_244_cov_0.900585_g24813_i0 PRJNA1214993 24999 244 0.900585 2.1974274 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 150 7.589999999999999e-32   NTclustered gi|2782902330|ref|XM_067068799.1| 252671 g24813 i0 84.667 18.9508196721311 150 23 61 0 95 244 772 921 PREDICTED: Clytia hemisphaerica ATP synthase subunit beta, mitochondrial-like (LOC136812302), mRNA blastn 4624 150 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
24556485 24556485 PRJNA1214993_P_NODE_25580_length_243_cov_0.905882_g25394_i0 PRJNA1214993 25580 243 0.905882 2.20129326 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 191 4.45e-44   NTclustered gi|2782923303|ref|XM_067072394.1| 252671 g25394 i0 84.184 31.1275720164609 196 31 81 0 23 218 640 445 PREDICTED: Clytia hemisphaerica ras-related protein Rab-11B-like (LOC136815973), mRNA blastn 7564 191 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;