RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1214993 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11809073 11809073 PRJNA1214993_P_NODE_8410_length_374_cov_2.465116_g8224_i0 PRJNA1214993 8410 374 2.465116 9.21953384 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 564 3.7e-156   NTclustered gi|238617605|gb|FJ973380.1| 45107 g8224 i0 93.85 99.7486631016043 374 23 100 0 1 374 1559 1186 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 37306 564 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13083934 13083934 PRJNA1214993_P_NODE_11551_length_324_cov_1.533865_g11365_i0 PRJNA1214993 11551 324 1.533865 4.9697226 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 477 4.2399999999999985e-130   NTclustered gi|238617605|gb|FJ973380.1| 45107 g11365 i0 93.252 90.5 326 19 100 3 1 324 2511 2187 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 29322 477 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
14359257 14359257 PRJNA1214993_P_NODE_12212_length_315_cov_3.024793_g12026_i0 PRJNA1214993 12212 315 3.024793 9.52809795 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 327 4.37e-85   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12026 i0 86.262 43.5555555555556 313 29 99 7 4 315 4008 3709 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 13720 327 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;