RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA1214993 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
330268 330268 PRJNA1214993_P_NODE_18961_length_257_cov_1.673913_g18775_i0 PRJNA1214993 18961 257 1.673913 4.30195641 Thecamonas trahens 529818 Root_unresolved Root_unresolved 191 4.75e-44   NTclustered gi|923125065|ref|XM_013900547.1| 461836 g18775 i0 85.635 42.5836575875486 181 26 70 0 3 183 679 859 Thecamonas trahens ATCC 50062 60S ribosomal protein L3 (AMSG_07514), mRNA blastn 10944 191 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6708087 6708087 PRJNA1214993_P_NODE_15366_length_284_cov_1.109005_g15180_i0 PRJNA1214993 15366 284 1.109005 3.1495742 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|923125635|ref|XM_013900832.1| 461836 g15180 i0 100 0.102112676056338 29 0 10 0 163 191 2039 2067 Thecamonas trahens ATCC 50062 leucine Rich Repeat family protein (AMSG_07384), mRNA blastn 29 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9258348 9258348 PRJNA1214993_P_NODE_7048_length_406_cov_2.612613_g6863_i0 PRJNA1214993 7048 406 2.612613 10.60720878 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|923122065|ref|XM_013899049.1| 461836 g6863 i0 100 0.29064039408867 30 0 7 0 251 280 1374 1403 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_08721), mRNA blastn 118 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23282411 23282411 PRJNA1214993_P_NODE_11739_length_321_cov_2.899194_g11553_i0 PRJNA1214993 11739 321 2.899194 9.30641274 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923122065|ref|XM_013899049.1| 461836 g11553 i0 100 0.367601246105919 30 0 9 0 34 63 1403 1374 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_08721), mRNA blastn 118 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;