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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA1214993 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
330289 330289 PRJNA1214993_P_NODE_21501_length_249_cov_2.835227_g21315_i0 PRJNA1214993 21501 249 2.835227 7.05971523 Platyamoeba placida 3454475 Discosea other_Eukaryota 344 3.32e-90   NTclustered gi|33946348|gb|AY294153.1| 197527 g21315 i0 91.566 97.9518072289157 249 21 100 0 1 249 887 639 Platyamoeba placida actin mRNA, partial cds blastn 24390 344 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
1605038 1605038 PRJNA1214993_P_NODE_17282_length_269_cov_1.984694_g17096_i0 PRJNA1214993 17282 269 1.984694 5.33882686 Dictyostelium discoideum 44689 Evosea other_Eukaryota 353 6.03e-93   NTclustered gi|66804872|ref|XM_631077.1| 352472 g17096 i0 90.335 98.1672862453532 269 26 100 0 1 269 936 668 Dictyostelium discoideum AX4 hypothetical protein (act1) mRNA, complete cds blastn 26407 353 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2881211 2881211 PRJNA1214993_P_NODE_17903_length_265_cov_1.046875_g17717_i0 PRJNA1214993 17903 265 1.046875 2.77421875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 1.03e-65   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g17717 i0 84.962 21.9584905660377 266 32 99 6 4 265 2153 1892 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 5819 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5433497 5433497 PRJNA1214993_P_NODE_22245_length_248_cov_0.891429_g22059_i0 PRJNA1214993 22245 248 0.891429 2.21074392 uncultured Soliformovum 2510342 Evosea other_Eukaryota 374 4.2099999999999995e-99   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g22059 i0 93.976 1.31854838709677 249 12 100 2 1 248 297 51 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 327 374 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
5433514 5433514 PRJNA1214993_P_NODE_24345_length_245_cov_0.895349_g24159_i0 PRJNA1214993 24345 245 0.895349 2.19360505 Didymium spongiosum 289992 Evosea other_Eukaryota 224 4.43e-54   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g24159 i0 83.936 7.70612244897959 249 25 100 13 1 245 7092 7329 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1888 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
5433599 5433599 PRJNA1214993_P_NODE_8465_length_373_cov_5.343333_g8279_i0 PRJNA1214993 8465 373 5.343333 19.93063209 Ripella tribonemae 2047823 Discosea other_Eukaryota 614 3.6099999999999997e-171   NTclustered gi|1269228443|gb|MF683568.1| 2047823 g8279 i0 97.253 94.3378016085791 364 6 97 4 1 362 1036 675 Ripella tribonemae clone 70.1.3 18S ribosomal RNA gene, partial sequence blastn 35188 614 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
6708165 6708165 PRJNA1214993_P_NODE_26626_length_231_cov_2.025316_g26440_i0 PRJNA1214993 26626 231 2.025316 4.67847996 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 291 4.02e-74   NTclustered gi|575488798|gb|KF772979.1| 180228 g26440 i0 90.455 100.17316017316 220 21 95 0 1 220 498 717 Paramoeba pemaquidensis strain PA027 beta actin mRNA, partial cds blastn 23140 291 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
7983704 7983704 PRJNA1214993_P_NODE_1647_length_805_cov_3.607923_g1487_i0 PRJNA1214993 1647 805 3.607923 29.04378015 Ripella sp. 1973050 Discosea other_Eukaryota 473 1.4599999999999998e-128   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g1487 i0 82.982 61.0832298136646 570 51 67 25 268 805 3 558 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 49172 473 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
9258220 9258220 PRJNA1214993_P_NODE_1288_length_901_cov_3.509662_g1143_i0 PRJNA1214993 1288 901 3.509662 31.62205462 Entamoeba dispar 46681 Evosea other_Eukaryota 562 3.4e-155   NTclustered gi|167393182|ref|XM_001740406.1| 370354 g1143 i0 78.58 68.8179800221976 873 171 96 13 1 868 862 1 Entamoeba dispar SAW760 elongation factor 1-alpha (EDI_196620), partial mRNA blastn 62005 562 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
9258277 9258277 PRJNA1214993_P_NODE_21648_length_249_cov_0.886364_g21462_i0 PRJNA1214993 21648 249 0.886364 2.20704636 Badhamia melanospora 1346252 Evosea other_Eukaryota 230 9.699999999999995e-56   NTclustered gi|2440757457|gb|OP616492.1| 1346252 g21462 i0 83.468 90.8835341365462 248 39 99 2 3 249 284 38 Badhamia melanospora voucher LE266197 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 22630 230 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia melanospora
10534249 10534249 PRJNA1214993_P_NODE_5529_length_455_cov_1.863874_g5344_i0 PRJNA1214993 5529 455 1.863874 8.4806267 Soliformovum irregulare 435424 Evosea other_Eukaryota 689 0   NTclustered gi|146448863|gb|EF513199.1| 435424 g5344 i0 94.989 92.3230769230769 439 22 96 0 17 455 303 741 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 42007 689 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
11248699 11248699 PRJNA1214993_P_NODE_18329_length_261_cov_3.255319_g18143_i0 PRJNA1214993 18329 261 3.255319 8.49638259 Ripella 1217112 Discosea other_Eukaryota 446 9.339999999999999e-121   NTclustered gi|399764203|gb|JQ271714.1| 1217114 g18143 i0 97.338 100.850574712644 263 5 100 2 1 261 1322 1584 Ripella sp. DP13 18S ribosomal RNA gene, partial sequence blastn 26322 446 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. DP13
11248719 11248719 PRJNA1214993_P_NODE_3189_length_592_cov_2.057803_g3008_i0 PRJNA1214993 3189 592 2.057803 12.18219376 Vannellidae 95227 Discosea other_Eukaryota 435 4.98e-117   NTclustered gi|62865947|gb|AY929922.1| 325065 g3008 i0 80.467 102.045608108108 599 91 100 19 1 592 1092 1671 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 60411 435 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
11808980 11808980 PRJNA1214993_P_NODE_23350_length_246_cov_1.803468_g23164_i0 PRJNA1214993 23350 246 1.803468 4.43653128 Heleopera baetica 2844938 Tubulinea other_Eukaryota 102 2.18e-17   NTclustered gi|2050647004|gb|MZ366437.1| 2844938 g23164 i0 88.372 29.1056910569106 86 8 35 2 82 166 209 293 Heleopera baetica isolate A1 small subunit ribosomal RNA gene, partial sequence blastn 7160 102 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Heleoperidae Heleopera Heleopera baetica
16907407 16907407 PRJNA1214993_P_NODE_13054_length_306_cov_0.892704_g12868_i0 PRJNA1214993 13054 306 0.892704 2.73167424 Acytostelium subglobosum 361139 Evosea other_Eukaryota 182 3.49e-41   NTclustered gi|831779727|ref|XM_012900357.1| 1410327 g12868 i0 86.391 44.437908496732 169 19 55 4 138 304 230 64 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 13598 182 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
16907430 16907430 PRJNA1214993_P_NODE_15994_length_279_cov_1.495146_g15808_i0 PRJNA1214993 15994 279 1.495146 4.17145734 Dictyostelium purpureum 5786 Evosea other_Eukaryota 187 6.749999999999998e-43   NTclustered gi|330792605|ref|XM_003284331.1| 5786 g15808 i0 79.545 51.5448028673835 264 52 94 2 1 263 893 631 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_52874), mRNA blastn 14381 187 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16907537 16907537 PRJNA1214993_P_NODE_574_length_1247_cov_6.677172_g487_i0 PRJNA1214993 574 1247 6.677172 83.26433484 Paramoeba branchiphila 308475 Discosea other_Eukaryota 754 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g487 i0 78.59 53.8388131515638 1149 238 92 7 1 1145 56 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 67137 754 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
18181935 18181935 PRJNA1214993_P_NODE_4935_length_480_cov_4.174447_g4750_i0 PRJNA1214993 4935 480 4.174447 20.0373456 Ripella sp. 805 1217113 Discosea other_Eukaryota 712 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g4750 i0 93.173 102.216666666667 498 13 100 9 1 480 4 498 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 49064 712 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
20731823 20731823 PRJNA1214993_P_NODE_4897_length_482_cov_2.158924_g4712_i0 PRJNA1214993 4897 482 2.158924 10.40601368 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 298 5.46e-76   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4712 i0 78.407 4.94813278008299 477 90 98 11 10 481 2520 2052 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 2385 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23282593 23282593 PRJNA1214993_P_NODE_999_length_993_cov_2.518478_g875_i0 PRJNA1214993 999 993 2.518478 25.00848654 Dictyostelium purpureum 5786 Evosea other_Eukaryota 1223 0   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g875 i0 88.979 98.1792547834844 989 109 99 0 5 993 1145 157 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 97492 1223 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
25271563 25271563 PRJNA1214993_P_NODE_4820_length_486_cov_1.886199_g4635_i0 PRJNA1214993 4820 486 1.886199 9.16692714 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 278 7.18e-70   NTclustered gi|470260760|ref|XM_004360149.1| 261658 g4635 i0 79.353 54.7057613168724 402 77 82 5 4 403 962 565 Cavenderia fasciculata elongation factor 1 alpha (efaAI), partial mRNA blastn 26587 279 0.996415770609319 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;