RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1204310 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3595461 3595461 PRJNA1204310_P_NODE_12543_length_497_cov_3.733491_g12246_i0 PRJNA1204310 12543 497 3.733491 18.55545027 Fungi 4751 Fungi Fungi 287 1.2199999999999998e-72   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g12246 i0 79.756 18.897384305835 410 71 81 12 81 484 404 1 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 9392 287 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
7982699 7982699 PRJNA1204310_P_NODE_36467_length_309_cov_0.991525_g36170_i0 PRJNA1204310 36467 309 0.991525 3.06381225 Kickxella alabastrina 61397 Fungi Fungi 182 3.53e-41   NTclustered gi|2324013387|ref|XM_051535816.1| 61397 g36170 i0 78.157 26.3980582524272 293 58 94 6 1 290 11207 10918 Kickxella alabastrina uncharacterized protein (BX661DRAFT_181839), mRNA blastn 8157 182 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
9257460 9257460 PRJNA1204310_P_NODE_49328_length_258_cov_1.475676_g49031_i0 PRJNA1204310 49328 258 1.475676 3.80724408 Linderina pennispora 61395 Fungi Fungi 56.5 0.002   NTclustered gi|2028319880|ref|XM_040883577.1| 61395 g49031 i0 92.5 0.418604651162791 40 2 15 1 158 196 240 279 Linderina pennispora uncharacterized protein (DL89DRAFT_153351), mRNA blastn 108 56.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
24554705 24554705 PRJNA1204310_P_NODE_10920_length_531_cov_1.360262_g10625_i0 PRJNA1204310 10920 531 1.360262 7.22299122 Linderina pennispora 61395 Fungi Fungi 399 1.6199999999999995e-106   NTclustered gi|2028322926|ref|XM_040888010.1| 61395 g10625 i0 81.466 91.8719397363465 491 87 92 4 22 510 883 395 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_268696), partial mRNA blastn 48784 399 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;