RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Evosea · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA1204310 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1604129 1604129 PRJNA1204310_P_NODE_4262_length_812_cov_2.560217_g4011_i0 PRJNA1204310 4262 812 2.560217 20.78896204 Acytostelium subglobosum 361139 Evosea other_Eukaryota 514 8.66e-141   NTclustered gi|831769224|ref|XM_012897186.1| 1410327 g4011 i0 79.106 49.0504926108374 761 148 93 10 4 757 776 20 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 39829 514 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
6707587 6707587 PRJNA1204310_P_NODE_62826_length_242_cov_0.923077_g62529_i0 PRJNA1204310 62826 242 0.923077 2.23384634 Cavenderia fasciculata 261658 Evosea other_Eukaryota 195 3.42e-45   NTclustered gi|470252539|ref|XM_004359310.1| 261658 g62529 i0 83.178 4.68181818181818 214 35 88 1 25 237 312 525 Cavenderia fasciculata ADP-ribosylation factor (arfA), partial mRNA blastn 1133 195 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
7982591 7982591 PRJNA1204310_P_NODE_32167_length_329_cov_1.218750_g31870_i0 PRJNA1204310 32167 329 1.21875 4.0096875 Acytostelium subglobosum 361139 Evosea other_Eukaryota 206 2.25e-48   NTclustered gi|831757058|ref|XM_012893458.1| 1410327 g31870 i0 78.261 4.60182370820669 345 58 100 9 1 329 300 643 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 1514 206 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10533243 10533243 PRJNA1204310_P_NODE_45329_length_274_cov_1.467662_g45032_i0 PRJNA1204310 45329 274 1.467662 4.02139388 Entamoeba dispar 46681 Evosea other_Eukaryota 159 1.4399999999999999e-34   NTclustered gi|167388768|ref|XM_001738637.1| 370354 g45032 i0 77.737 7.63138686131387 274 52 99 9 1 271 872 1139 Entamoeba dispar SAW760 26S protease regulatory subunit 6A, putative (EDI_316920), partial mRNA blastn 2091 159 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
11248428 11248428 PRJNA1204310_P_NODE_6629_length_668_cov_1.586555_g6349_i0 PRJNA1204310 6629 668 1.586555 10.5981874 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 477 9.259999999999999e-130   NTclustered gi|2329703236|gb|MW239988.1| 218861 g6349 i0 80.625 96.2769461077844 640 104 94 17 23 652 631 2 Physarum didermoides strain MA-Fungi 57262 alpha tubulin (aTUB) gene, partial cds blastn 64313 477 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum didermoides
11808325 11808325 PRJNA1204310_P_NODE_58990_length_245_cov_1.808140_g58693_i0 PRJNA1204310 58990 245 1.80814 4.429943 Dictyostelium purpureum 5786 Evosea other_Eukaryota 165 2.72e-36   NTclustered gi|330822609|ref|XM_003291694.1| 5786 g58693 i0 79.913 7.19183673469388 229 43 93 3 1 228 380 154 Dictyostelium purpureum uncharacterized protein (rasG), mRNA blastn 1762 165 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
13082382 13082382 PRJNA1204310_P_NODE_18571_length_417_cov_1.401163_g18274_i0 PRJNA1204310 18571 417 1.401163 5.84284971 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.04   NTclustered gi|1160557250|ref|XM_020574450.1| 670386 g18274 i0 100 0.0671462829736211 28 0 7 0 214 241 1377 1350 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
13083230 13083230 PRJNA1204310_P_NODE_52851_length_251_cov_0.876404_g52554_i0 PRJNA1204310 52851 251 0.876404 2.19977404 Acytostelium subglobosum 361139 Evosea other_Eukaryota 169 2.1599999999999996e-37   NTclustered gi|831782418|ref|XM_012901225.1| 1410327 g52554 i0 80.444 4.70119521912351 225 40 89 4 29 251 618 396 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 1180 169 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15632004 15632004 PRJNA1204310_P_NODE_33633_length_322_cov_1.240964_g33336_i0 PRJNA1204310 33633 322 1.240964 3.99590408 Dictyostelium discoideum 44689 Evosea other_Eukaryota 67.6 1.08e-6   NTclustered gi|66826678|ref|XM_641602.1| 352472 g33336 i0 100 6.14906832298137 36 0 11 0 271 306 763 728 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0270310) mRNA, complete cds blastn 1980 67.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
16906210 16906210 PRJNA1204310_P_NODE_30634_length_336_cov_2.178707_g30337_i0 PRJNA1204310 30634 336 2.178707 7.32045552 Entamoeba dispar 46681 Evosea other_Eukaryota 206 2.3e-48   NTclustered gi|167393850|ref|XM_001740688.1| 370354 g30337 i0 79.016 19.1011904761905 305 60 90 4 34 336 1598 1296 Entamoeba dispar SAW760 cation-transporting ATPase, putative (EDI_082290), partial mRNA blastn 6418 206 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
16906976 16906976 PRJNA1204310_P_NODE_7194_length_644_cov_1.775832_g6910_i0 PRJNA1204310 7194 644 1.775832 11.43635808 Dictyostelium purpureum 5786 Evosea other_Eukaryota 339 4.39e-88   NTclustered gi|330844711|ref|XM_003294212.1| 5786 g6910 i0 77.738 10.7173913043478 557 120 86 4 83 637 61 615 Dictyostelium purpureum succinyl coenzyme A synthetase alpha subunit (DICPUDRAFT_159229), partial mRNA blastn 6902 339 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18180794 18180794 PRJNA1204310_P_NODE_35855_length_312_cov_0.916318_g35558_i0 PRJNA1204310 35855 312 0.916318 2.85891216 Dictyostelium purpureum 5786 Evosea other_Eukaryota 237 7.5e-58   NTclustered gi|330803517|ref|XM_003289704.1| 5786 g35558 i0 87.081 66.875 209 27 67 0 63 271 4 212 Dictyostelium purpureum rac1B, RHO family GTPase (rac1B), partial mRNA blastn 20865 237 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19454892 19454892 PRJNA1204310_P_NODE_18656_length_416_cov_2.262391_g18359_i0 PRJNA1204310 18656 416 2.262391 9.41154656 Acytostelium subglobosum 361139 Evosea other_Eukaryota 303 1e-77   NTclustered gi|831772403|ref|XM_012898140.1| 1410327 g18359 i0 81.768 71.71875 362 66 87 0 8 369 1 362 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 29835 303 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
19455444 19455444 PRJNA1204310_P_NODE_43096_length_282_cov_1.803828_g42799_i0 PRJNA1204310 43096 282 1.803828 5.08679496 Acytostelium subglobosum 361139 Evosea other_Eukaryota 169 2.48e-37   NTclustered gi|831768659|ref|XM_012897017.1| 1410327 g42799 i0 86.076 1.65248226950355 158 20 56 2 126 282 819 663 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 466 169 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
22005504 22005504 PRJNA1204310_P_NODE_15358_length_454_cov_1.246719_g15061_i0 PRJNA1204310 15358 454 1.246719 5.66010426 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52.8 0.044   NTclustered gi|470250106|ref|XM_004367228.1| 261658 g15061 i0 100 0.0616740088105727 28 0 6 0 381 408 1219 1192 Cavenderia fasciculata MAP kinase phosphatase (mkpA), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
22721811 22721811 PRJNA1204310_P_NODE_1278_length_1305_cov_33.933442_g1142_i0 PRJNA1204310 1278 1305 33.933442 442.8314181 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 856 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g1142 i0 80.694 84.1808429118774 1124 197 85 18 69 1182 29 1142 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 109856 863 0.99188876013905 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
22721815 22721815 PRJNA1204310_P_NODE_13238_length_485_cov_2.563107_g12941_i0 PRJNA1204310 13238 485 2.563107 12.43106895 Dictyostelium 5782 Evosea other_Eukaryota 207 9.53e-49   NTclustered gi|167940|gb|M23750.1|DDIUBIQC 44689 g12941 i0 82.969 55.7835051546392 229 39 47 0 257 485 229 1 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV20 blastn 27055 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24555332 24555332 PRJNA1204310_P_NODE_37100_length_306_cov_1.206009_g36803_i0 PRJNA1204310 37100 306 1.206009 3.69038754 Physarum polycephalum 5791 Evosea other_Eukaryota 222 2.06e-53   NTclustered gi|119552593|gb|EF140724.1| 5791 g36803 i0 86.275 64.3366013071895 204 28 67 0 35 238 342 139 Physarum polycephalum 14-3-3-like protein mRNA, complete cds blastn 19687 222 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;