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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1204310 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
329472 329472 PRJNA1204310_P_NODE_49721_length_256_cov_2.617486_g49424_i0 PRJNA1204310 49721 256 2.617486 6.70076416 Asterias rubens 7604 Echinodermata other_Eukaryota 58.4 5e-4   NTclustered gi|1834289145|ref|XM_033784639.1| 7604 g49424 i0 97.059 0.1328125 34 1 13 0 47 80 398 365 PREDICTED: Asterias rubens histone H1-gamma, late-like (LOC117300811), mRNA blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
6147848 6147848 PRJNA1204310_P_NODE_45585_length_273_cov_1.560000_g45288_i0 PRJNA1204310 45585 273 1.56 4.2588 Lytechinus 7652 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|2707443830|ref|XM_064105445.1| 7653 g45288 i0 100 0.43956043956044 30 0 11 0 216 245 2941 2970 PREDICTED: Lytechinus pictus DNA topoisomerase 3-alpha-like (LOC129270265), mRNA blastn 120 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
6147887 6147887 PRJNA1204310_P_NODE_58205_length_246_cov_0.901734_g57908_i0 PRJNA1204310 58205 246 0.901734 2.21826564 Opisthokonta 33154 Echinodermata other_Eukaryota 62.1 3.69e-5   NTclustered gi|2707420584|ref|XM_054902833.2| 7653 g57908 i0 95 5.66666666666667 40 0 16 2 3 41 1078 1116 PREDICTED: Lytechinus pictus thyroid transcription factor 1-like (LOC129264876), transcript variant X1, mRNA blastn 1394 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
9257133 9257133 PRJNA1204310_P_NODE_34428_length_318_cov_1.591837_g34131_i0 PRJNA1204310 34428 318 1.591837 5.06204166 Lytechinus pictus 7653 Echinodermata other_Eukaryota 189 2.1799999999999998e-43   NTclustered gi|2707400898|ref|XM_064113156.1| 7653 g34131 i0 78.788 15.2767295597484 297 51 92 8 12 302 452 162 PREDICTED: Lytechinus pictus small ribosomal subunit protein uS11A (LOC129282285), transcript variant X2, mRNA blastn 4858 189 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;