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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1204310 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
328868 328868 PRJNA1204310_P_NODE_23061_length_380_cov_2.335505_g22764_i0 PRJNA1204310 23061 380 2.335505 8.874919 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.036   NTclustered gi|2082240632|ref|XM_043060214.1| 3055 g22764 i0 96.875 0.0842105263157895 32 0 8 1 86 116 6241 6272 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g143151v5), mRNA blastn 32 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1604632 1604632 PRJNA1204310_P_NODE_962_length_1426_cov_12.594235_g613_i1 PRJNA1204310 962 1426 12.594235 179.5937911 Chlorella variabilis 554065 Plants Plants 918 0   NTclustered gi|552834565|ref|XM_005848699.1| 554065 g613 i1 79.272 57.5056100981767 1346 255 94 21 39 1372 1402 69 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59648) mRNA, complete cds blastn 82003 918 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
2880665 2880665 PRJNA1204310_P_NODE_61003_length_243_cov_2.217647_g60706_i0 PRJNA1204310 61003 243 2.217647 5.38888221 Micromonas commoda 296587 Plants Plants 183 7.44e-42   NTclustered gi|255083115|ref|XM_002504498.1| 296587 g60706 i0 83.168 26.2345679012346 202 33 83 1 6 207 208 408 Micromonas commoda predicted protein (H2A), partial mRNA blastn 6375 183 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
4155754 4155754 PRJNA1204310_P_NODE_17844_length_424_cov_4.250712_g17547_i0 PRJNA1204310 17844 424 4.250712 18.02301888 Monoraphidium neglectum 145388 Plants Plants 126 2.37e-24   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g17547 i0 86.325 1.53066037735849 117 15 27 1 139 254 281 165 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 649 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
4155948 4155948 PRJNA1204310_P_NODE_25384_length_365_cov_1.886986_g25087_i0 PRJNA1204310 25384 365 1.886986 6.8874989 Mantoniella tinhauana 3097027 Plants Plants 54.7 0.01   NTclustered gi|2735153280|gb|CP140065.1| 3097027 g25087 i0 100 0.232876712328767 29 0 8 0 215 243 1630176 1630148 Mantoniella tinhauana isolate LFS chromosome 4 blastn 85 54.7 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
4155996 4155996 PRJNA1204310_P_NODE_27404_length_353_cov_1.671429_g27107_i0 PRJNA1204310 27404 353 1.671429 5.90014437 Chlamydomonas reinhardtii 3055 Plants Plants 195 5.24e-45   NTclustered gi|2082253475|ref|XM_001695212.2| 3055 g27107 i0 77.049 105.909348441926 366 67 100 12 1 353 754 1115 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA blastn 37386 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4156070 4156070 PRJNA1204310_P_NODE_30704_length_336_cov_1.311787_g30407_i0 PRJNA1204310 30704 336 1.311787 4.40760432 Mantoniella tinhauana 3097027 Plants Plants 283 1.0300000000000001e-71   NTclustered gi|2735153279|gb|CP140064.1| 3097027 g30407 i0 82.282 97.8422619047619 333 53 98 5 1 330 1560671 1561000 Mantoniella tinhauana isolate LFS chromosome 3 blastn 32875 283 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
4873182 4873182 PRJNA1204310_P_NODE_4884_length_764_cov_1.791606_g4626_i0 PRJNA1204310 4884 764 1.791606 13.68786984 Eukaryota 2759 Plants Plants 481 8.25e-131   NTclustered gi|2082247947|ref|XM_001698013.2| 3055 g4626 i0 82.815 69.130890052356 547 85 71 7 8 548 742 199 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA blastn 52816 481 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5431981 5431981 PRJNA1204310_P_NODE_185_length_2210_cov_4.649977_g156_i0 PRJNA1204310 185 2210 4.649977 102.7644917 Micromonas commoda 296587 Plants Plants 1177 0   NTclustered gi|255072104|ref|XM_002499681.1| 296587 g156 i0 78.626 80.8348416289593 1848 344 83 42 74 1897 2015 195 Micromonas commoda predicted protein partial mRNA blastn 178645 1177 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
5432246 5432246 PRJNA1204310_P_NODE_29345_length_343_cov_1.170370_g29048_i0 PRJNA1204310 29345 343 1.17037 4.0143691 Auxenochlorella protothecoides 3075 Plants Plants 106 2.45e-18   NTclustered gi|760444350|ref|XM_011400942.1| 3075 g29048 i0 81.395 0.376093294460641 129 24 38 0 193 321 4 132 Auxenochlorella protothecoides Mediator of RNA polymerase II transcription subunit 36a partial mRNA blastn 129 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
6706615 6706615 PRJNA1204310_P_NODE_20506_length_400_cov_0.926606_g20209_i0 PRJNA1204310 20506 400 0.926606 3.706424 Mantoniella tinhauana 3097027 Plants Plants 195 6.02e-45   NTclustered gi|2735153279|gb|CP140064.1| 3097027 g20209 i0 79.252 6.145 294 50 72 11 84 371 422390 422678 Mantoniella tinhauana isolate LFS chromosome 3 blastn 2458 195 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
7982488 7982488 PRJNA1204310_P_NODE_27747_length_351_cov_2.003597_g27450_i0 PRJNA1204310 27747 351 2.003597 7.03262547 Micromonas commoda 296587 Plants Plants 320 8.23e-83   NTclustered gi|255072104|ref|XM_002499681.1| 296587 g27450 i0 83.381 95.9088319088319 349 54 99 3 1 347 1487 1833 Micromonas commoda predicted protein partial mRNA blastn 33664 320 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
8697986 8697986 PRJNA1204310_P_NODE_41327_length_288_cov_1.753488_g41030_i0 PRJNA1204310 41327 288 1.753488 5.05004544 Eukaryota 2759 Plants Plants 246 1.14e-60   NTclustered gi|371782091|emb|HE610123.1| 3107 g41030 i0 91.351 64.2083333333333 185 9 64 6 54 236 4947 5126 Hydrodictyon reticulatum 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain M2243 blastn 18492 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Hydrodictyon Hydrodictyon reticulatum
8698020 8698020 PRJNA1204310_P_NODE_50467_length_253_cov_2.022222_g50170_i0 PRJNA1204310 50467 253 2.022222 5.11622166 Eukaryota 2759 Plants Plants 222 1.65e-53   NTclustered gi|552840508|ref|XM_005850003.1| 554065 g50170 i0 87.5 85.0592885375494 192 24 76 0 3 194 534 343 Chlorella variabilis heat shock protein 70 (CHLNCDRAFT_56032) mRNA, complete cds blastn 21520 224 0.991071428571429 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
9973165 9973165 PRJNA1204310_P_NODE_5468_length_729_cov_1.983232_g5206_i0 PRJNA1204310 5468 729 1.983232 14.45776128 Opisthokonta 33154 Plants Plants 531 7.69e-146   NTclustered gi|255071996|ref|XM_002499627.1| 296587 g5206 i0 80.945 88.4348422496571 677 123 92 6 1 674 590 1263 Micromonas commoda hypothetical protein mRNA blastn 64469 531 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
11807667 11807667 PRJNA1204310_P_NODE_30390_length_338_cov_1.037736_g30093_i0 PRJNA1204310 30390 338 1.037736 3.50754768 Volvox carteri 3067 Plants Plants 52.8 0.032   NTclustered gi|302843576|ref|XM_002953284.1| 3068 g30093 i0 100 0.0828402366863905 28 0 8 0 270 297 49 22 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_94009), partial mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
11808071 11808071 PRJNA1204310_P_NODE_48050_length_263_cov_2.031579_g47753_i0 PRJNA1204310 48050 263 2.031579 5.34305277 Monoraphidium neglectum 145388 Plants Plants 56.5 0.002   NTclustered gi|926764953|ref|XM_014036075.1| 145388 g47753 i0 96.97 10.1673003802281 33 1 13 0 155 187 843 811 Monoraphidium neglectum hypothetical protein mRNA blastn 2674 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
12523721 12523721 PRJNA1204310_P_NODE_44990_length_275_cov_1.905941_g44693_i0 PRJNA1204310 44990 275 1.905941 5.24133775 Chlorophyta 3041 Plants Plants 222 1.82e-53   NTclustered gi|255085001|ref|XM_002504886.1| 296587 g44693 i0 84.513 74.9236363636364 226 33 82 2 2 226 541 765 Micromonas commoda predicted protein mRNA blastn 20604 224 0.991071428571429 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
14357858 14357858 PRJNA1204310_P_NODE_22232_length_386_cov_2.354633_g21935_i0 PRJNA1204310 22232 386 2.354633 9.08888338 Chlamydomonas reinhardtii 3055 Plants Plants 296 1.54e-75   NTclustered gi|2082256114|ref|XM_001702538.2| 3055 g21935 i0 83.489 77.8704663212435 321 49 83 4 68 386 1367 1049 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g422600v5), mRNA blastn 30058 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15631739 15631739 PRJNA1204310_P_NODE_22413_length_385_cov_1.500000_g22116_i0 PRJNA1204310 22413 385 1.5 5.775 Chlamydomonas reinhardtii 3055 Plants Plants 268 3.35e-67   NTclustered gi|2082256849|ref|XM_001690492.2| 3055 g22116 i0 79.381 38.2805194805195 388 74 100 5 1 385 1827 1443 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g439850v5), mRNA blastn 14738 268 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15632409 15632409 PRJNA1204310_P_NODE_52373_length_252_cov_0.871508_g52076_i0 PRJNA1204310 52373 252 0.871508 2.19620016 Monoraphidium neglectum 145388 Plants Plants 52.8 0.023   NTclustered gi|926792994|ref|XM_014049517.1| 145388 g52076 i0 100 0.111111111111111 28 0 11 0 64 91 1471 1444 Monoraphidium neglectum Ubiquitin carboxyl-terminal hydrolase 1 mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
15632457 15632457 PRJNA1204310_P_NODE_54673_length_250_cov_0.881356_g54376_i0 PRJNA1204310 54673 250 0.881356 2.20339 Volvox carteri 3067 Plants Plants 233 7.529999999999999e-57   NTclustered gi|302847252|ref|XM_002955115.1| 3068 g54376 i0 84.082 2 245 36 97 2 1 242 187 431 Volvox carteri f. nagariensis component of cytosolic 80S ribosome and 40S small subunit (rps10), mRNA blastn 500 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
15632602 15632602 PRJNA1204310_P_NODE_61073_length_243_cov_1.452941_g60776_i0 PRJNA1204310 61073 243 1.452941 3.53064663 Chlamydomonas reinhardtii 3055 Plants Plants 102 2.14e-17   NTclustered gi|2082259286|ref|XM_001703115.2| 3055 g60776 i0 82.114 0.506172839506173 123 18 50 4 28 148 293 173 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g483950v5), mRNA blastn 123 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22006046 22006046 PRJNA1204310_P_NODE_38278_length_300_cov_2.484581_g37981_i0 PRJNA1204310 38278 300 2.484581 7.453743 Micromonas commoda 296587 Plants Plants 163 1.24e-35   NTclustered gi|255072180|ref|XM_002499719.1| 296587 g37981 i0 77.027 42.3633333333333 296 60 97 5 1 292 323 32 Micromonas commoda predicted protein mRNA blastn 12709 163 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
23280749 23280749 PRJNA1204310_P_NODE_12799_length_493_cov_1.297619_g12502_i0 PRJNA1204310 12799 493 1.297619 6.39726167 Chlamydomonas reinhardtii 3055 Plants Plants 78.7 7.94e-10   NTclustered gi|2082260972|ref|XM_043068437.1| 3055 g12502 i0 78.571 0.389452332657201 126 21 24 3 302 421 455 580 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g524800v5), mRNA blastn 192 78.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23281296 23281296 PRJNA1204310_P_NODE_34599_length_317_cov_1.918033_g34302_i0 PRJNA1204310 34599 317 1.918033 6.08016461 Chlamydomonas reinhardtii 3055 Plants Plants 379 1.1999999999999999e-100   NTclustered gi|2082265357|ref|XM_001692764.2| 3055 g34302 i0 88.71 91.8044164037855 310 35 98 0 8 317 1201 892 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g625400v5), mRNA blastn 29102 379 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23997121 23997121 PRJNA1204310_P_NODE_38299_length_300_cov_1.779736_g38002_i0 PRJNA1204310 38299 300 1.779736 5.339208 Eukaryota 2759 Plants Plants 159 1.6e-34   NTclustered gi|2082256323|ref|XM_043066580.1| 3055 g38002 i0 81.538 62.55 195 34 65 2 107 300 1496 1303 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g427700v5), mRNA blastn 18765 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24555472 24555472 PRJNA1204310_P_NODE_43440_length_281_cov_1.437500_g43143_i0 PRJNA1204310 43440 281 1.4375 4.039375 Micromonas commoda 296587 Plants Plants 305 1.8e-78   NTclustered gi|255088288|ref|XM_002506021.1| 296587 g43143 i0 89.069 83.5907473309609 247 26 88 1 36 281 46 292 Micromonas commoda alpha tubulin 1 (TUA1), mRNA blastn 23489 305 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
25271077 25271077 PRJNA1204310_P_NODE_10360_length_544_cov_5.783439_g10067_i0 PRJNA1204310 10360 544 5.783439 31.46190816 Eukaryota 2759 Plants Plants 316 1.7199999999999996e-81   NTclustered gi|2082259086|ref|XM_001697336.2| 3055 g10067 i0 81.654 64.7334558823529 387 65 71 6 115 498 127 510 Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA blastn 35215 318 0.993710691823899 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
25271175 25271175 PRJNA1204310_P_NODE_3920_length_840_cov_3.061278_g3674_i0 PRJNA1204310 3920 840 3.061278 25.7147352 Eukaryota 2759 Plants Plants 438 5.549999999999999e-118   NTclustered gi|2082237163|ref|XM_043058766.1| 3055 g3674 i0 80 69.322619047619 605 111 71 8 179 778 191 790 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g039250v5), mRNA blastn 58231 440 0.995454545454545 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;