RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1204310 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11808002 11808002 PRJNA1204310_P_NODE_44890_length_276_cov_1.152709_g44593_i0 PRJNA1204310 44890 276 1.152709 3.18147684 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 193 1.43e-44   NTclustered gi|219129759|ref|XM_002185013.1| 556484 g44593 i0 83.495 11.9710144927536 206 34 75 0 8 213 278 483 Phaeodactylum tricornutum CCAP 1055/1 calmoduline (CaM1), mRNA blastn 3304 193 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
16347463 16347463 PRJNA1204310_P_NODE_2453_length_1019_cov_1.584567_g2254_i0 PRJNA1204310 2453 1019 1.584567 16.14673773 root 1 Root_unresolved Root_unresolved 73.1 7.94e-8   NTclustered gi|2026158947|ref|NC_054334.1| 444606 g2254 i0 97.619 12.0245338567223 42 1 4 0 646 687 29385 29344 Eucampia zodiacus strain CNS00060 mitochondrion, complete genome blastn 12253 73.1 1 Eukaryota Sar   Bacillariophyta Mediophyceae Hemiaulales Hemiaulaceae Eucampia Eucampia zodiacus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;