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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA1204310" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1204310 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
329687 329687 PRJNA1204310_P_NODE_60781_length_244_cov_0.912281_g60484_i0 PRJNA1204310 60781 244 0.912281 2.22596564 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 178 3.48e-40   NTclustered gi|1027954050|ref|XM_736288.2| 31271 g60484 i0 83.854 21.9426229508197 192 25 77 6 21 209 1044 856 Plasmodium chabaudi chabaudi heat shock protein 90, putative (PCHAS_0806000), partial mRNA blastn 5354 178 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
1045067 1045067 PRJNA1204310_P_NODE_44341_length_278_cov_1.141463_g44044_i0 PRJNA1204310 44341 278 1.141463 3.17326714 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|915122814|ref|XM_013477217.1| 5804 g44044 i0 100 0.244604316546763 29 0 10 0 139 167 2273 2245 Eimeria maxima hypothetical protein partial mRNA blastn 68 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
1603820 1603820 PRJNA1204310_P_NODE_30242_length_338_cov_2.626415_g29945_i0 PRJNA1204310 30242 338 2.626415 8.8772827 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 211 4.97e-50   NTclustered gi|1843572353|ref|XM_034565981.1| 5823 g29945 i0 82.213 56.414201183432 253 37 74 8 90 338 348 100 Plasmodium berghei ANKA ubiquitin-60S ribosomal protein L40, putative (PBANKA_1141700), partial mRNA blastn 19068 211 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
2320334 2320334 PRJNA1204310_P_NODE_30202_length_339_cov_1.000000_g29905_i0 PRJNA1204310 30202 339 1 3.39 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915011464|ref|XM_013395973.1| 5801 g29905 i0 100 8.49262536873156 30 0 9 0 180 209 4123 4152 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 2879 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
2320429 2320429 PRJNA1204310_P_NODE_882_length_1468_cov_9.222222_g774_i0 PRJNA1204310 882 1468 9.222222 135.38221896 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 867 0   NTclustered gi|260323703|dbj|AK317816.1| 5811 g774 i0 78.629 49.8780653950954 1357 255 91 27 121 1461 231 1568 Toxoplasma gondii cDNA, clone: XTG00910.2, full cDNA, XTG Sugano cDNA library blastn 73221 867 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
2879525 2879525 PRJNA1204310_P_NODE_12963_length_489_cov_4.391827_g12666_i0 PRJNA1204310 12963 489 4.391827 21.47603403 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 272 3.36e-68   NTclustered gi|126649276|ref|XM_001388273.1| 353152 g12666 i0 80.27 7.8118609406953 370 66 75 5 5 370 478 112 Cryptosporidium parvum Iowa II ribosomal protein S23 (cgd6_1390) mRNA, partial cds blastn 3820 272 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
4873205 4873205 PRJNA1204310_P_NODE_58104_length_246_cov_1.306358_g57807_i0 PRJNA1204310 58104 246 1.306358 3.21364068 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 278 3.37e-70   NTclustered gi|67649700|gb|DQ070855.1| 5821 g57807 i0 86.992 88.739837398374 246 32 100 0 1 246 4508 4263 Plasmodium berghei alpha-tubulin I gene, complete cds blastn 21830 278 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
6707037 6707037 PRJNA1204310_P_NODE_3726_length_859_cov_3.033079_g3489_i0 PRJNA1204310 3726 859 3.033079 26.05414861 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 835 0   NTclustered gi|820690367|tpe|LN714481.1| 572307 g3489 i0 84.744 94.419091967404 839 122 97 6 4 839 898356 897521 TPA_asm: Neospora caninum Liverpool, chromosome chrVIIa, complete genome blastn 81106 835 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6707205 6707205 PRJNA1204310_P_NODE_44826_length_276_cov_1.256158_g44529_i0 PRJNA1204310 44826 276 1.256158 3.46699608 Plasmodium inui 52288 SAR_Eukaryotes SAR_Eukaryotes 182 3.1e-41   NTclustered gi|672193152|ref|XM_008817791.1| 1237626 g44529 i0 78.777 3.67391304347826 278 53 99 6 1 275 1205 931 Plasmodium inui San Antonio 1 26S proteasome regulatory subunit 4 like B partial mRNA blastn 1014 182 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
6707261 6707261 PRJNA1204310_P_NODE_47186_length_267_cov_1.268041_g46889_i0 PRJNA1204310 47186 267 1.268041 3.38566947 Cryptosporidium baileyi 27987 SAR_Eukaryotes SAR_Eukaryotes 161 3.89e-35   NTclustered gi|20799266|gb|AF382346.1| 27987 g46889 i0 80.569 49.310861423221 211 39 79 2 9 218 528 319 Cryptosporidium baileyi isolate 764 actin gene, partial cds blastn 13166 161 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium baileyi
7422941 7422941 PRJNA1204310_P_NODE_44846_length_276_cov_1.192118_g44549_i0 PRJNA1204310 44846 276 1.192118 3.29024568 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|916414071|ref|XM_013372813.1| 5802 g44549 i0 100 2.44202898550725 29 0 11 0 181 209 1676 1704 Eimeria tenella uncharacterized protein (ETH_00021815), partial mRNA blastn 674 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
7982392 7982392 PRJNA1204310_P_NODE_23347_length_378_cov_2.245902_g23050_i0 PRJNA1204310 23347 378 2.245902 8.48950956 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 307 6.960000000000001e-79   NTclustered gi|2794942285|ref|XM_067859410.1| 5871 g23050 i0 81.867 22.6666666666667 375 58 98 10 1 370 1011 642 Babesia caballi histone deacetylase HDAC3 (BcabD6B2_28770), partial mRNA blastn 8568 307 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
8697929 8697929 PRJNA1204310_P_NODE_27687_length_352_cov_1.060932_g27390_i0 PRJNA1204310 27687 352 1.060932 3.73448064 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|915016507|ref|XM_013397494.1| 5801 g27390 i0 100 8.96590909090909 29 0 8 0 242 270 2329 2357 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 3156 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
11248268 11248268 PRJNA1204310_P_NODE_16629_length_438_cov_1.906849_g16332_i0 PRJNA1204310 16629 438 1.906849 8.35199862 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 220 1.1e-52   NTclustered gi|1673116253|ref|XM_029363433.1| 94643 g16332 i0 80.272 54.4132420091324 294 56 67 2 145 437 1300 1008 Besnoitia besnoiti beta-tubulin (BESB_049820), partial mRNA blastn 23833 220 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
13082873 13082873 PRJNA1204310_P_NODE_37231_length_305_cov_1.594828_g36934_i0 PRJNA1204310 37231 305 1.594828 4.8642254 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|915147041|ref|XM_013483080.1| 5804 g36934 i0 94.118 1.67213114754098 34 2 11 0 99 132 1029 996 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 510 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
14357717 14357717 PRJNA1204310_P_NODE_16612_length_438_cov_4.767123_g16315_i0 PRJNA1204310 16612 438 4.767123 20.87999874 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 209 2.37e-49   NTclustered gi|66359883|ref|XM_627120.1| 353152 g16315 i0 78.997 7.16438356164384 319 57 72 10 44 357 380 67 Cryptosporidium parvum Iowa II histone H2A (cgd8_2170) mRNA, complete cds blastn 3138 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
15072660 15072660 PRJNA1204310_P_NODE_32932_length_325_cov_1.464286_g32635_i0 PRJNA1204310 32932 325 1.464286 4.7589295 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|1843569182|ref|XM_034564222.1| 5823 g32635 i0 100 0.350769230769231 29 0 9 0 143 171 4958 4930 Plasmodium berghei ANKA DNA-directed RNA polymerase II subunit RPB1, putative (PBANKA_0807000), partial mRNA blastn 114 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
20730772 20730772 PRJNA1204310_P_NODE_397_length_1843_cov_16.852542_g345_i0 PRJNA1204310 397 1843 16.852542 310.59234906 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 1158 0   NTclustered gi|624291|gb|U19268.1|ETU19268 5802 g345 i0 82.586 66.5398806294086 1315 227 71 2 122 1435 143 1456 Eimeria tenella beta-tubulin mRNA, complete cds blastn 122633 1158 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
20731070 20731070 PRJNA1204310_P_NODE_53297_length_251_cov_0.876404_g53000_i0 PRJNA1204310 53297 251 0.876404 2.19977404 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 134 7.9e-27   NTclustered gi|1843573240|ref|XM_034566472.1| 5823 g53000 i0 78.037 2.0398406374502 214 45 85 2 39 251 142 354 Plasmodium berghei ANKA ribosome-interacting GTPase 1, putative (PBANKA_1239200), partial mRNA blastn 512 134 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
22006360 22006360 PRJNA1204310_P_NODE_53578_length_251_cov_0.876404_g53281_i0 PRJNA1204310 53578 251 0.876404 2.19977404 Plasmodium floridense 31275 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|821389578|gb|KR477721.1| 31275 g53281 i0 100 0.669322709163347 28 0 11 0 14 41 72 45 Plasmodium floridense isolate REG2251 histone H3 (HisH3) gene, partial cds blastn 168 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium floridense
22006620 22006620 PRJNA1204310_P_NODE_7738_length_623_cov_1.796364_g7452_i0 PRJNA1204310 7738 623 1.796364 11.19134772 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 171 1.64e-37   NTclustered gi|915004992|ref|XM_013394145.1| 5801 g7452 i0 78.339 0.903691813804173 277 50 44 8 3 274 136 407 Eimeria acervulina phosphatidylinositol-4-phosphate 5-kinase, putative partial mRNA blastn 563 171 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
22006622 22006622 PRJNA1204310_P_NODE_778_length_1535_cov_3.513680_g685_i0 PRJNA1204310 778 1535 3.51368 53.934988 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 1511 0   NTclustered gi|916427472|ref|XM_013379513.1| 5802 g685 i0 84.858 100.237133550489 1519 208 98 19 28 1535 269 1776 Eimeria tenella uncharacterized protein (ETH_00000210), partial mRNA blastn 153864 1511 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
23281196 23281196 PRJNA1204310_P_NODE_30559_length_337_cov_1.178030_g30262_i0 PRJNA1204310 30559 337 1.17803 3.9699611 Cryptosporidium meleagridis 93969 SAR_Eukaryotes SAR_Eukaryotes 235 2.9399999999999995e-57   NTclustered gi|18152888|gb|AF221537.2|AF221537 93969 g30262 i0 81.188 87.2878338278932 303 47 88 10 40 337 1539 1242 Cryptosporidium meleagridis heat shock protein 70 (HSP70) gene, partial cds blastn 29416 237 0.991561181434599 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;