RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1200128" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1200128 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16904125 16904125 PRJNA1200128_S_NODE_17254_length_213_cov_1.382353_g17145_i0 PRJNA1200128 17254 213 1.382353 2.94441189 Zychaea mexicana 64656 Fungi Fungi 148 2.32e-31   NTclustered gi|2432171132|ref|XM_053128223.1| 64656 g17145 i0 82.84 6.1830985915493 169 25 78 3 39 205 263 97 Zychaea mexicana 60S ribosomal protein L37a (BDB00DRAFT_883335), partial mRNA blastn 1317 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
16904249 16904249 PRJNA1200128_S_NODE_47154_length_152_cov_76.339450_g47045_i0 PRJNA1200128 47154 152 76.33945 116.035964 Mucor mucedo 29922 Fungi Fungi 58.4 2.67e-4   NTclustered gi|2324075884|ref|XM_051603668.1| 29922 g47045 i0 94.737 0.25 38 0 25 1 45 82 253 218 Mucor mucedo uncharacterized protein (EV154DRAFT_529412), mRNA blastn 38 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;