RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1200128" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1200128 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2320061 2320061 PRJNA1200128_S_NODE_3162_length_377_cov_18.257485_g3053_i0 PRJNA1200128 3162 377 18.257485 68.83071845 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 686 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g3053 i0 99.469 596.249336870027 377 2 100 0 1 377 247 623 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 224786 691 0.992764109985528 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
9255126 9255126 PRJNA1200128_S_NODE_8988_length_261_cov_44.362385_g8879_i0 PRJNA1200128 8988 261 44.362385 115.78582485 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 477 3.3099999999999986e-130   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g8879 i0 100 1359.3601532567 258 0 99 0 4 261 1650 1907 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 354793 477 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;