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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA1200128" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 23 ✖

bioproject 1

  • PRJNA1200128 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
326992 326992 PRJNA1200128_S_NODE_1941_length_474_cov_11469.538283_g1835_i0 PRJNA1200128 1941 474 11469.538283 54365.61146142 Betacoronavirus pandemicum 3418604 Viruses Viruses 119 4.4800000000000005e-22   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g1835 i0 94.805 28.2552742616034 77 2 16 2 390 466 160 86 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 13393 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
1601687 1601687 PRJNA1200128_S_NODE_11542_length_241_cov_6.393939_g11433_i0 PRJNA1200128 11542 241 6.393939 15.40939299 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g11433 i0 100 0.477178423236515 30 0 12 0 212 241 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
2877863 2877863 PRJNA1200128_S_NODE_10563_length_248_cov_2.175610_g10454_i0 PRJNA1200128 10563 248 2.17561 5.3955128 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g10454 i0 96.97 0.245967741935484 33 0 13 1 217 248 38 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
5430205 5430205 PRJNA1200128_S_NODE_24665_length_191_cov_0.952703_g24556_i0 PRJNA1200128 24665 191 0.952703 1.81966273 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g24556 i0 100 0.738219895287958 29 0 15 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5430274 5430274 PRJNA1200128_S_NODE_4065_length_340_cov_3.286195_g3956_i0 PRJNA1200128 4065 340 3.286195 11.173063 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g3956 i0 100 0.338235294117647 30 0 9 0 1 30 56 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
5430306 5430306 PRJNA1200128_S_NODE_4925_length_317_cov_1748.098540_g4816_i0 PRJNA1200128 4925 317 1748.09854 5541.4723718 Betacoronavirus pandemicum 3418604 Viruses Viruses 119 2.89e-22   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g4816 i0 94.805 26.1261829652997 77 2 24 2 9 85 86 160 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8282 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6704828 6704828 PRJNA1200128_S_NODE_25126_length_189_cov_6.102740_g25017_i0 PRJNA1200128 25126 189 6.10274 11.5341786 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g25017 i0 100 0.301587301587302 29 0 15 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
6704937 6704937 PRJNA1200128_S_NODE_7686_length_274_cov_20455.783550_g7577_i0 PRJNA1200128 7686 274 20455.78355 56048.846927 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 5.26e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g7577 i0 96.104 26.3649635036496 77 1 28 2 190 266 160 86 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7224 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9254957 9254957 PRJNA1200128_S_NODE_12128_length_237_cov_24312.355670_g12019_i0 PRJNA1200128 12128 237 24312.35567 57620.2829379 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 4.44e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g12019 i0 96.104 27.9620253164557 77 1 32 2 9 85 86 160 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 6627 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9972831 9972831 PRJNA1200128_S_NODE_4788_length_320_cov_17934.873646_g4679_i0 PRJNA1200128 4788 320 17934.873646 57391.5956672 Viruses 10239 Viruses Viruses 119 2.92e-22   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g4679 i0 94.805 23.425 77 2 24 2 236 312 160 86 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7496 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
10530988 10530988 PRJNA1200128_S_NODE_6209_length_293_cov_3.296000_g6100_i0 PRJNA1200128 6209 293 3.296 9.65728 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g6100 i0 100 0.197952218430034 30 0 10 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
11805557 11805557 PRJNA1200128_S_NODE_11530_length_241_cov_8.277778_g11421_i0 PRJNA1200128 11530 241 8.277778 19.94944498 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g11421 i0 100 0.477178423236515 30 0 12 0 1 30 56 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
11805706 11805706 PRJNA1200128_S_NODE_5010_length_315_cov_17308.573529_g4901_i0 PRJNA1200128 5010 315 17308.573529 54522.00661635 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 6.159999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g4901 i0 96.104 26.3396825396825 77 1 24 2 9 85 86 160 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8297 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13080744 13080744 PRJNA1200128_S_NODE_5491_length_306_cov_2.250951_g5382_i0 PRJNA1200128 5491 306 2.250951 6.88791006 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.008   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g5382 i0 100 0.186274509803922 29 0 9 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
13080751 13080751 PRJNA1200128_S_NODE_6651_length_287_cov_2.315574_g6542_i0 PRJNA1200128 6651 287 2.315574 6.64569738 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g6542 i0 100 0.198606271777003 29 0 10 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
15629875 15629875 PRJNA1200128_S_NODE_21353_length_200_cov_0.847134_g21244_i0 PRJNA1200128 21353 200 0.847134 1.694268 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g21244 i0 100 0.285 29 0 15 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15630009 15630009 PRJNA1200128_S_NODE_7933_length_272_cov_1.615721_g7824_i0 PRJNA1200128 7933 272 1.615721 4.39476112 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g7824 i0 96.97 0.224264705882353 33 1 12 0 1 33 6 38 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18178615 18178615 PRJNA1200128_S_NODE_11535_length_241_cov_7.075758_g11426_i0 PRJNA1200128 11535 241 7.075758 17.05257678 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g11426 i0 100 0.477178423236515 30 0 12 0 212 241 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
20171004 20171004 PRJNA1200128_S_NODE_9396_length_257_cov_18270.299065_g9287_i0 PRJNA1200128 9396 257 18270.299065 46954.66859705 Viruses 10239 Viruses Viruses 122 1.7599999999999994e-23   NTclustered gi|2165835030|emb|OV196298.1| 2697049 g9287 i0 96.053 25.2645914396887 76 1 30 2 9 84 77 150 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 6493 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20728398 20728398 PRJNA1200128_S_NODE_10637_length_247_cov_23118.078431_g10528_i0 PRJNA1200128 10637 247 23118.078431 57101.65372457 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 4.66e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g10528 i0 96.104 33.6518218623482 77 1 31 2 9 85 86 160 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8312 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22003887 22003887 PRJNA1200128_S_NODE_6518_length_288_cov_19295.224490_g6409_i0 PRJNA1200128 6518 288 19295.22449 55570.2465312 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 5.57e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g6409 i0 96.104 28.8333333333333 77 1 27 2 204 280 160 86 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8304 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23996784 23996784 PRJNA1200128_S_NODE_13139_length_231_cov_21076.595745_g13030_i0 PRJNA1200128 13139 231 21076.595745 48686.93617095 Viruses 10239 Viruses Viruses 122 1.55e-23   NTclustered gi|2165835030|emb|OV196298.1| 2697049 g13030 i0 96.053 28.0562770562771 76 1 35 2 9 84 77 150 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 6481 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24553243 24553243 PRJNA1200128_S_NODE_5740_length_301_cov_2.968992_g5631_i0 PRJNA1200128 5740 301 2.968992 8.93666592 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 60.2 1.67e-4   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g5631 i0 97.222 0.461794019933555 36 0 12 1 1 36 51 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 139 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;