contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1199893" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1044692 | 1044692 | PRJNA1199893_P_NODE_14701_length_249_cov_1.227273_g14626_i0 | PRJNA1199893 | 14701 | 249 | 1.227273 | 3.05590977 | Glutamicibacter | 1742989 | Bacteria | Bacteria | 422 | 1.49e-113 | NTclustered | gi|1906898532|gb|CP059853.1| | 37929 | g14626 | i0 | 97.189 | 441.971887550201 | 249 | 7 | 100 | 0 | 1 | 249 | 100792 | 100544 | Glutamicibacter nicotianae strain ZM05 chromosome, complete genome | blastn | 110051 | 422 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Glutamicibacter | Glutamicibacter nicotianae | ||
| 1601290 | 1601290 | PRJNA1199893_P_NODE_11782_length_279_cov_1.199029_g11707_i0 | PRJNA1199893 | 11782 | 279 | 1.199029 | 3.34529091 | Raineyella sp. LH-20 | 3081204 | Bacteria | Bacteria | 388 | 1.7199999999999998e-103 | NTclustered | gi|2606726494|gb|CP137003.1| | 3081204 | g11707 | i0 | 91.786 | 250.666666666667 | 280 | 21 | 100 | 2 | 1 | 279 | 99714 | 99992 | Raineyella sp. LH-20 chromosome, complete genome | blastn | 69936 | 388 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Raineyella | Raineyella sp. LH-20 | ||
| 2877819 | 2877819 | PRJNA1199893_P_NODE_8283_length_332_cov_0.737452_g8208_i0 | PRJNA1199893 | 8283 | 332 | 0.737452 | 2.44834064 | Corynebacterium tuberculostearicum | 38304 | Bacteria | Bacteria | 599 | 8.909999999999998e-167 | NTclustered | gi|2547420364|gb|CP073093.1| | 38304 | g8208 | i0 | 99.394 | 355.972891566265 | 330 | 2 | 99 | 0 | 1 | 330 | 293068 | 293397 | Corynebacterium tuberculostearicum strain CTNIH12 chromosome, complete genome | blastn | 118183 | 599 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 11247963 | 11247963 | PRJNA1199893_P_NODE_5549_length_408_cov_1.167164_g5475_i0 | PRJNA1199893 | 5549 | 408 | 1.167164 | 4.76202912 | Actinomycetes | 1760 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|254972631|gb|GQ329251.1| | 114050 | g5475 | i0 | 95.355 | 121.291666666667 | 409 | 18 | 100 | 1 | 1 | 408 | 136 | 544 | Uncultured Arthrobacter sp. clone P4s-190 16S ribosomal RNA gene, partial sequence | blastn | 49487 | 652 | 0.995398773006135 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | uncultured Arthrobacter sp. | ||
| 13080356 | 13080356 | PRJNA1199893_P_NODE_16431_length_244_cov_0.900585_g16356_i0 | PRJNA1199893 | 16431 | 244 | 0.900585 | 2.1974274 | Corynebacterium minutissimum | 38301 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1403572617|emb|LS483460.1| | 38301 | g16356 | i0 | 100 | 7.21311475409836 | 244 | 0 | 100 | 0 | 1 | 244 | 171178 | 171421 | Corynebacterium minutissimum strain NCTC10288 genome assembly, chromosome: 1 | blastn | 1760 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium minutissimum | ||
| 14355837 | 14355837 | PRJNA1199893_P_NODE_5112_length_425_cov_2.303977_g5039_i0 | PRJNA1199893 | 5112 | 425 | 2.303977 | 9.79190225 | Corynebacterium kefirresidentii | 1979527 | Bacteria | Bacteria | 756 | 0 | NTclustered | gi|2869819920|gb|CP175795.1| | 1979527 | g5039 | i0 | 98.824 | 361.771764705882 | 425 | 4 | 99 | 1 | 2 | 425 | 788415 | 787991 | Corynebacterium kefirresidentii strain YSMAA1_1_C6 chromosome, complete genome | blastn | 153753 | 756 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 17622395 | 17622395 | PRJNA1199893_P_NODE_4014_length_478_cov_1.217284_g3941_i0 | PRJNA1199893 | 4014 | 478 | 1.217284 | 5.81861752 | Bacteria | 2 | Bacteria | Bacteria | 54.7 | 0.013 | NTclustered | gi|2209700036|dbj|AP025668.1| | 1912 | g3941 | i0 | 96.875 | 1.66317991631799 | 32 | 1 | 7 | 0 | 368 | 399 | 2208162 | 2208193 | Streptomyces hygroscopicus HOK021 DNA, complete genome | blastn | 795 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces hygroscopicus | ||
| 20170933 | 20170933 | PRJNA1199893_P_NODE_9796_length_305_cov_1.137931_g9721_i0 | PRJNA1199893 | 9796 | 305 | 1.137931 | 3.47068955 | Arthrobacter | 1663 | Bacteria | Bacteria | 492 | 1.41e-134 | NTclustered | gi|2719889153|gb|CP151657.1| | 1670 | g9721 | i0 | 95.738 | 447.072131147541 | 305 | 13 | 100 | 0 | 1 | 305 | 751595 | 751291 | Arthrobacter citreus strain EINP1 chromosome, complete genome | blastn | 136357 | 492 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter citreus | ||
| 22721554 | 22721554 | PRJNA1199893_P_NODE_8778_length_322_cov_2.168675_g8703_i0 | PRJNA1199893 | 8778 | 322 | 2.168675 | 6.9831335 | Corynebacterium | 1716 | Bacteria | Bacteria | 278 | 4.58e-70 | NTclustered | gi|2869819920|gb|CP175795.1| | 1979527 | g8703 | i0 | 100 | 25.2204968944099 | 150 | 0 | 93 | 0 | 1 | 150 | 421392 | 421243 | Corynebacterium kefirresidentii strain YSMAA1_1_C6 chromosome, complete genome | blastn | 8121 | 278 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 25270839 | 25270839 | PRJNA1199893_P_NODE_12240_length_273_cov_1.925000_g12165_i0 | PRJNA1199893 | 12240 | 273 | 1.925 | 5.25525 | Glutamicibacter | 1742989 | Bacteria | Bacteria | 499 | 7.45e-137 | NTclustered | gi|2688610184|gb|CP033081.2| | 37929 | g12165 | i0 | 99.635 | 279.970695970696 | 274 | 0 | 100 | 1 | 1 | 273 | 92044 | 92317 | Glutamicibacter nicotianae strain OTC-16 chromosome, complete genome | blastn | 76432 | 499 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Glutamicibacter | Glutamicibacter nicotianae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;