RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1199330" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1199330 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
325886 325886 PRJNA1199330_P_NODE_64181_length_287_cov_1.457944_g63482_i0 PRJNA1199330 64181 287 1.457944 4.18429928 Mucor velutinosus 708070 Fungi Fungi 435 2.26e-117   NTclustered gi|2724932593|ref|XM_064824709.1| 708070 g63482 i0 94.056 17.8188153310105 286 17 99 0 2 287 356 71 Mucor velutinosus uncharacterized protein (ATC70_005420), partial mRNA blastn 5114 435 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
15628787 15628787 PRJNA1199330_P_NODE_69093_length_282_cov_3.033493_g68394_i0 PRJNA1199330 69093 282 3.033493 8.55445026 Mucor velutinosus 708070 Fungi Fungi 54.7 0.007   NTclustered gi|2724910815|ref|XM_064820299.1| 708070 g68394 i0 100 0.102836879432624 29 0 10 0 209 237 713 741 Mucor velutinosus vacuolar transporter chaperone (VTC4_1), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
24552052 24552052 PRJNA1199330_P_NODE_6400_length_840_cov_7.362451_g5838_i0 PRJNA1199330 6400 840 7.362451 61.8445884 Mucor velutinosus 708070 Fungi Fungi 54.7 0.024   NTclustered gi|2724910815|ref|XM_064820299.1| 708070 g5838 i0 100 0.0345238095238095 29 0 3 0 599 627 741 713 Mucor velutinosus vacuolar transporter chaperone (VTC4_1), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;