contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1199330" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2319198 | 2319198 | PRJNA1199330_P_NODE_109102_length_247_cov_0.896552_g108403_i0 | PRJNA1199330 | 109102 | 247 | 0.896552 | 2.21448344 | Truepera | 332248 | Bacteria | Bacteria | 390 | 4.1699999999999997e-104 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g108403 | i0 | 95.142 | 756.461538461538 | 247 | 12 | 100 | 0 | 1 | 247 | 2694 | 2940 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 186846 | 390 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 5429032 | 5429032 | PRJNA1199330_P_NODE_59825_length_291_cov_1.059633_g59126_i0 | PRJNA1199330 | 59825 | 291 | 1.059633 | 3.08353203 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 532 | 7.9e-147 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g59126 | i0 | 99.656 | 19.1958762886598 | 291 | 1 | 100 | 0 | 1 | 291 | 2785839 | 2786129 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 5586 | 532 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 6702789 | 6702789 | PRJNA1199330_P_NODE_110206_length_246_cov_1.803468_g109507_i0 | PRJNA1199330 | 110206 | 246 | 1.803468 | 4.43653128 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g109507 | i0 | 99.593 | 112.260162601626 | 246 | 1 | 100 | 0 | 1 | 246 | 67426 | 67181 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 27616 | 449 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 7979810 | 7979810 | PRJNA1199330_P_NODE_95107_length_258_cov_1.686486_g94408_i0 | PRJNA1199330 | 95107 | 258 | 1.686486 | 4.35113388 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 472 | 1.52e-128 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g94408 | i0 | 99.612 | 14.922480620155 | 258 | 1 | 100 | 0 | 1 | 258 | 1208229 | 1208486 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 3850 | 472 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 8696795 | 8696795 | PRJNA1199330_P_NODE_102587_length_251_cov_2.595506_g101888_i0 | PRJNA1199330 | 102587 | 251 | 2.595506 | 6.51472006 | Thermus | 270 | Bacteria | Bacteria | 420 | 5.41e-113 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g101888 | i0 | 96.813 | 7.9362549800796804 | 251 | 8 | 100 | 0 | 1 | 251 | 2071630 | 2071380 | Thermus scotoductus SA-01, complete genome | blastn | 1992 | 420 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 9252792 | 9252792 | PRJNA1199330_P_NODE_100328_length_253_cov_0.866667_g99629_i0 | PRJNA1199330 | 100328 | 253 | 0.866667 | 2.19266751 | Thermus thermophilus | 274 | Bacteria | Bacteria | 440 | 4.189999999999998e-119 | NTclustered | gi|333965676|gb|CP002777.1| | 762633 | g99629 | i0 | 98.024 | 16.6679841897233 | 253 | 5 | 100 | 0 | 1 | 253 | 1651295 | 1651043 | Thermus thermophilus SG0.5JP17-16, complete genome | blastn | 4217 | 440 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 9972340 | 9972340 | PRJNA1199330_P_NODE_36488_length_342_cov_3.672862_g35789_i0 | PRJNA1199330 | 36488 | 342 | 3.672862 | 12.56118804 | Thermus | 270 | Bacteria | Bacteria | 610 | 4.25e-170 | NTclustered | gi|470468782|ref|NR_076136.1| | 37636 | g35789 | i0 | 98.834 | 144.850877192982 | 343 | 3 | 100 | 1 | 1 | 342 | 179 | 521 | Thermus scotoductus strain SA-01 23S ribosomal RNA gene, complete sequence | blastn | 49539 | 610 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 13079859 | 13079859 | PRJNA1199330_P_NODE_88871_length_264_cov_2.167539_g88172_i0 | PRJNA1199330 | 88871 | 264 | 2.167539 | 5.72230296 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 477 | 3.359999999999999e-130 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g88172 | i0 | 99.242 | 39.8598484848485 | 264 | 2 | 100 | 0 | 1 | 264 | 609447 | 609184 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 10523 | 477 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 13079904 | 13079904 | PRJNA1199330_P_NODE_91711_length_261_cov_2.712766_g91012_i0 | PRJNA1199330 | 91711 | 261 | 2.712766 | 7.08031926 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g91012 | i0 | 100 | 6 | 261 | 0 | 100 | 0 | 1 | 261 | 1146083 | 1145823 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 1566 | 483 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 16903245 | 16903245 | PRJNA1199330_P_NODE_80514_length_272_cov_1.994975_g79815_i0 | PRJNA1199330 | 80514 | 272 | 1.994975 | 5.426332 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 503 | 5.729999999999998e-138 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g79815 | i0 | 100 | 11.9926470588235 | 272 | 0 | 100 | 0 | 1 | 272 | 278254 | 278525 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 3262 | 503 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;