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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1199330" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA1199330 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2876686 2876686 PRJNA1199330_P_NODE_59363_length_291_cov_1.839450_g58664_i0 PRJNA1199330 59363 291 1.83945 5.3527995 Giardia muris 5742 Fornicata other_Eukaryota 538 1.6999999999999994e-148   NTclustered gi|1464306470|gb|MG708270.1| 5742 g58664 i0 100 1 291 0 100 0 1 291 3170 2880 Giardia muris Pyruvate-flavodoxin oxidoreductase (GM_15987) gene, complete cds blastn 291 538 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
4152030 4152030 PRJNA1199330_P_NODE_118844_length_236_cov_2.987730_g118145_i0 PRJNA1199330 118844 236 2.98773 7.0510428 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 274 4.15e-69   NTclustered gi|2794869128|ref|XM_067917910.1| 135588 g118145 i0 87.712 26.9533898305085 236 27 99 2 1 235 556 322 Histomonas meleagridis cytoplasmic heat shock protein 70 (GO595_004745), partial mRNA blastn 6361 274 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
7978305 7978305 PRJNA1199330_P_NODE_106827_length_248_cov_3.108571_g106128_i0 PRJNA1199330 106827 248 3.108571 7.70925608 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 154 5.98e-33   NTclustered gi|2806448940|ref|XM_068499773.1| 1144522 g106128 i0 80.597 0.810483870967742 201 37 81 2 25 224 521 322 Tritrichomonas foetus 60S ribosomal protein L19 (rpl19), partial mRNA blastn 201 154 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
13078600 13078600 PRJNA1199330_P_NODE_112711_length_244_cov_2.672515_g112012_i0 PRJNA1199330 112711 244 2.672515 6.5209366 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 357 4.16e-94   NTclustered gi|2806485532|ref|XM_068512746.1| 1144522 g112012 i0 92.623 38.405737704918 244 18 100 0 1 244 253 10 Tritrichomonas foetus Tubulin alpha-1A chain (TRFO_39597), partial mRNA blastn 9371 357 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
13079821 13079821 PRJNA1199330_P_NODE_86091_length_267_cov_1.463918_g85392_i0 PRJNA1199330 86091 267 1.463918 3.90866106 Spironucleus muris 39710 Fornicata other_Eukaryota 446 9.589999999999998e-121   NTclustered gi|1322229|gb|U37079.1|SMU37079 39710 g85392 i0 100 79.5955056179775 241 0 90 0 1 241 241 1 Spironucleus muris alpha tubulin gene, partial cds blastn 21252 446 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus muris
14355110 14355110 PRJNA1199330_P_NODE_78992_length_273_cov_3.315000_g78293_i0 PRJNA1199330 78992 273 3.315 9.04995 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 255 1.7800000000000001e-63   NTclustered gi|418210017|gb|JX187096.1| 1144522 g78293 i0 84.091 8.82417582417582 264 42 97 0 2 265 892 629 Tritrichomonas foetus isolate Sydney08-1 cysteine protease 8 (CP8) gene, partial cds blastn 2409 255 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;