RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1198392" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1198392 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11803299 11803299 PRJNA1198392_P_NODE_650_length_938_cov_7.885549_g540_i0 PRJNA1198392 650 938 7.885549 73.96644962 Brachionus rubens 392764 Rotifera other_Eukaryota 472 6.14e-128   NTclustered gi|1802791198|gb|MN256531.1| 392764 g540 i0 82.531 30.3027718550107 561 75 59 18 339 888 11253 11801 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 28424 472 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
15071459 15071459 PRJNA1198392_P_NODE_15132_length_254_cov_2.502762_g14991_i0 PRJNA1198392 15132 254 2.502762 6.35701548 Asplanchna 84396 Rotifera other_Eukaryota 219 2.1499999999999998e-52   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g14991 i0 83.402 14.6850393700787 241 35 94 5 16 254 2124 2361 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 3730 219 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;