RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1198392" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1198392 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9252628 9252628 PRJNA1198392_P_NODE_2888_length_441_cov_2.334239_g2747_i0 PRJNA1198392 2888 441 2.334239 10.29399399 Abditibacteriota bacterium 2783868 Bacteria Bacteria 496 1.6399999999999998e-135   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2747 i0 88.462 90.5056689342404 416 41 93 5 31 439 2852152 2851737 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 39913 496 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
15627470 15627470 PRJNA1198392_P_NODE_3333_length_416_cov_1.586006_g3192_i0 PRJNA1198392 3333 416 1.586006 6.59778496 Abditibacteriota bacterium 2783868 Bacteria Bacteria 366 1.2599999999999995e-96   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g3192 i0 83.135 107.043269230769 421 51 99 15 3 416 2850842 2851249 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 44530 366 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;