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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA1198392" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA1198392 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
324776 324776 PRJNA1198392_P_NODE_8981_length_287_cov_1.439252_g8840_i0 PRJNA1198392 8981 287 1.439252 4.13065324 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 455 1.73e-123   NTclustered gi|166039156|emb|CU355206.1| 100861 g8840 i0 95.439 17.4878048780488 285 13 99 0 3 287 457 741 Aphanomyces euteiches cDNA blastn 5019 455 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
1599306 1599306 PRJNA1198392_P_NODE_2082_length_512_cov_1.753986_g1941_i0 PRJNA1198392 2082 512 1.753986 8.98040832 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 324 9.62e-84   NTclustered gi|669195261|ref|XM_008624420.1| 54757 g1941 i0 78.947 81.607421875 494 90 95 13 26 512 1131 645 Plasmodium vinckei vinckei actin II, putative (PVVCY_1406140), partial mRNA blastn 41783 324 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
3594243 3594243 PRJNA1198392_P_NODE_2203_length_500_cov_3.480094_g2062_i0 PRJNA1198392 2203 500 3.480094 17.40047 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 924 0   NTclustered gi|1411267247|gb|MH549414.1| 88167 g2062 i0 100 49.534 500 0 100 0 1 500 97 596 Poterioochromonas malhamensis strain SAG933-1c internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 24767 924 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
4871866 4871866 PRJNA1198392_P_NODE_5004_length_353_cov_8.185714_g4863_i0 PRJNA1198392 5004 353 8.185714 28.89557042 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 652 0   NTclustered gi|2647530748|gb|PP112999.1| 88167 g4863 i0 100 100.640226628895 353 0 100 0 1 353 1281 1633 Poterioochromonas malhamensis strain NIES2144 small subunit ribosomal RNA gene, partial sequence blastn 35526 652 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
7977782 7977782 PRJNA1198392_P_NODE_10607_length_279_cov_1.966019_g10466_i0 PRJNA1198392 10607 279 1.966019 5.48519301 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 508 1.27e-139   NTclustered gi|111035915|emb|AJ781092.1| 35100 g10466 i0 99.64 100.007168458781 278 1 99 0 2 279 342 65 Cyclidium glaucoma partial 23S rRNA gene, strain ATCC 30701 blastn 27902 508 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
7977950 7977950 PRJNA1198392_P_NODE_17747_length_248_cov_0.880000_g17606_i0 PRJNA1198392 17747 248 0.88 2.1824 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 381 2.519999999999999e-101   NTclustered gi|166039156|emb|CU355206.1| 100861 g17606 i0 94.355 3.92338709677419 248 14 100 0 1 248 182 429 Aphanomyces euteiches cDNA blastn 973 381 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7978123 7978123 PRJNA1198392_P_NODE_5987_length_330_cov_1.194553_g5846_i0 PRJNA1198392 5987 330 1.194553 3.9420249 Proschkinia sp. SZCZR1824 2588390 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.43e-10   NTclustered gi|1681061561|gb|MH800316.1| 2588390 g5846 i0 76.433 2.10606060606061 157 31 47 6 57 211 4566 4414 Proschkinia sp. SZCZR1824 mitochondrion, complete genome blastn 695 80.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Proschkiniaceae Proschkinia Proschkinia sp. SZCZR1824
10528491 10528491 PRJNA1198392_P_NODE_3229_length_421_cov_1.221264_g3088_i0 PRJNA1198392 3229 421 1.221264 5.14152144 Tetrahymena nigricans 2704176 SAR_Eukaryotes SAR_Eukaryotes 586 8.989999999999997e-163   NTclustered gi|2082965251|gb|MZ827091.1| 2704176 g3088 i0 95.187 91.4394299287411 374 12 95 5 26 398 517 885 Tetrahymena nigricans isolate VB57 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38496 586 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena nigricans
10528532 10528532 PRJNA1198392_P_NODE_5349_length_345_cov_1.562500_g5208_i0 PRJNA1198392 5349 345 1.5625 5.390625 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 377 4.74e-100   NTclustered gi|698802575|ref|XM_009836015.1| 112090 g5208 i0 86.905 11.8 336 44 97 0 10 345 621 286 Aphanomyces astaci hypothetical protein mRNA blastn 4071 377 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
13078409 13078409 PRJNA1198392_P_NODE_8351_length_290_cov_1.184332_g8210_i0 PRJNA1198392 8351 290 1.184332 3.4345628 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 448 2.9299999999999995e-121   NTclustered gi|1270185585|gb|MG266086.1| 175275 g8210 i0 94.483 100.096551724138 290 16 100 0 1 290 616 327 Uncultured Cercozoa clone MossITSLSU68 large subunit ribosomal RNA gene, partial sequence blastn 29028 448 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
16346329 16346329 PRJNA1198392_P_NODE_3813_length_392_cov_3.043887_g3672_i0 PRJNA1198392 3813 392 3.043887 11.93203704 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 422 2.48e-113   NTclustered gi|16326553|gb|AF409121.1| 64707 g3672 i0 90.214 57.1275510204082 327 26 82 6 1 323 3602 3926 Chrysolepidomonas dendrolepidota internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 22394 422 1 Eukaryota Sar     Chrysophyceae Chromulinales Chrysolepidomonadaceae Chrysolepidomonas Chrysolepidomonas dendrolepidota
19450645 19450645 PRJNA1198392_P_NODE_18936_length_245_cov_1.366279_g18795_i0 PRJNA1198392 18936 245 1.366279 3.34738355 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 126 1.28e-24   NTclustered gi|673016233|ref|XM_008863856.1| 157072 g18795 i0 79 1.63265306122449 200 30 79 8 44 237 389 196 Aphanomyces invadans hypothetical protein mRNA blastn 400 126 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
20725787 20725787 PRJNA1198392_P_NODE_11497_length_275_cov_1.480198_g11356_i0 PRJNA1198392 11497 275 1.480198 4.0705445 Colpodella angusta 1541798 SAR_Eukaryotes SAR_Eukaryotes 492 1.26e-134   NTclustered gi|972268869|gb|KU159286.1| 1541798 g11356 i0 98.909 3.90181818181818 275 3 100 0 1 275 4183 4457 Colpodella angusta 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1073 492 1 Eukaryota Sar         Colpodellaceae Colpodella Colpodella angusta
22001478 22001478 PRJNA1198392_P_NODE_6318_length_322_cov_1.851406_g6177_i0 PRJNA1198392 6318 322 1.851406 5.96152732 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 573 5.219999999999998e-159   NTclustered gi|325194231|emb|FR825088.1| 890382 g6177 i0 98.758 2.10869565217391 322 4 100 0 1 322 1535 1214 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 679 573 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24550945 24550945 PRJNA1198392_P_NODE_9360_length_285_cov_1.452830_g9219_i0 PRJNA1198392 9360 285 1.45283 4.1405655 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 180 1.16e-40   NTclustered gi|813141828|ref|XM_012343699.1| 695850 g9219 i0 79.545 0.926315789473684 264 44 91 8 15 273 69 327 Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA blastn 264 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;