contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA1198392" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9971801 | 9971801 | PRJNA1198392_P_NODE_11168_length_277_cov_1.083333_g11027_i0 | PRJNA1198392 | 11168 | 277 | 1.083333 | 3.00083241 | Candidatus Mycosynbacter | 2831665 | Bacteria | Bacteria | 424 | 4.69e-114 | NTclustered | gi|2874253873|emb|OY969928.1| | 179883 | g11027 | i0 | 94.526 | 236.945848375451 | 274 | 15 | 99 | 0 | 1 | 274 | 598709 | 598436 | MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 | blastn | 65634 | 425 | 0.997647058823529 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | uncultured Candidatus Saccharibacteria bacterium | ||||||
| 11247033 | 11247033 | PRJNA1198392_P_NODE_13049_length_267_cov_1.587629_g12908_i0 | PRJNA1198392 | 13049 | 267 | 1.587629 | 4.23896943 | Bacteria | 2 | Bacteria | Bacteria | 401 | 2.1099999999999995e-107 | NTclustered | gi|837350690|gb|CP011211.1| | 1619070 | g12908 | i0 | 95.635 | 223.602996254682 | 252 | 8 | 94 | 3 | 4 | 253 | 850581 | 850831 | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome | blastn | 59702 | 401 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | ||||||
| 11803043 | 11803043 | PRJNA1198392_P_NODE_15090_length_255_cov_1.362637_g14949_i0 | PRJNA1198392 | 15090 | 255 | 1.362637 | 3.47472435 | Candidatus Nanosynbacter sp. BB002 | 3393757 | Bacteria | Bacteria | 449 | 7.03e-122 | NTclustered | gi|2692798772|gb|CP146064.1| | 3393757 | g14949 | i0 | 98.431 | 2 | 255 | 4 | 100 | 0 | 1 | 255 | 403595 | 403849 | Candidatus Nanosynbacter sp. BB002 chromosome, complete genome | blastn | 510 | 449 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. BB002 | ||
| 11803173 | 11803173 | PRJNA1198392_P_NODE_20550_length_242_cov_1.408284_g20409_i0 | PRJNA1198392 | 20550 | 242 | 1.408284 | 3.40804728 | Candidatus Saccharimonadia bacterium | 2890869 | Bacteria | Bacteria | 99 | 2.76e-16 | NTclustered | gi|2874254002|emb|OY970327.1| | 2890869 | g20409 | i0 | 77.665 | 0.814049586776859 | 197 | 21 | 74 | 14 | 18 | 195 | 738840 | 738648 | MAG: Candidatus Saccharimonadia bacterium isolate MFD01275.bin.c.7 genome assembly, chromosome: 1 | blastn | 197 | 99 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadia bacterium | |||||
| 15627483 | 15627483 | PRJNA1198392_P_NODE_3973_length_386_cov_1.837061_g3832_i0 | PRJNA1198392 | 3973 | 386 | 1.837061 | 7.09105546 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 630 | 3.7199999999999986e-176 | NTclustered | gi|1950821269|gb|CP066696.1| | 2026720 | g3832 | i0 | 96.124 | 249.924870466321 | 387 | 13 | 100 | 2 | 1 | 386 | 799131 | 798746 | Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome | blastn | 96471 | 630 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 16901732 | 16901732 | PRJNA1198392_P_NODE_17754_length_248_cov_0.880000_g17613_i0 | PRJNA1198392 | 17754 | 248 | 0.88 | 2.1824 | Candidatus Southlakia epibionticum | 3043284 | Bacteria | Bacteria | 359 | 1.18e-94 | NTclustered | gi|2516687873|gb|CP124550.1| | 3043284 | g17613 | i0 | 95.928 | 4.46774193548387 | 221 | 9 | 89 | 0 | 28 | 248 | 189866 | 190086 | Candidatus Southlakia epibionticum strain ML1 chromosome, complete genome | blastn | 1108 | 359 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Southlakia | Candidatus Southlakia epibionticum | ||
| 20170054 | 20170054 | PRJNA1198392_P_NODE_6256_length_323_cov_3.568000_g6115_i0 | PRJNA1198392 | 6256 | 323 | 3.568 | 11.52464 | Candidatus Saccharimonas | 1331051 | Bacteria | Bacteria | 534 | 2.47e-147 | NTclustered | gi|499052612|gb|CP005957.1| | 1332188 | g6115 | i0 | 96.594 | 68.2941176470588 | 323 | 10 | 100 | 1 | 1 | 323 | 696443 | 696122 | Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome | blastn | 22059 | 534 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas aalborgensis | ||
| 23276719 | 23276719 | PRJNA1198392_P_NODE_15719_length_251_cov_0.865169_g15578_i0 | PRJNA1198392 | 15719 | 251 | 0.865169 | 2.17157419 | Candidatus Gracilibacteria bacterium 28_42_T64 | 1862133 | Bacteria | Bacteria | 377 | 3.2999999999999995e-100 | NTclustered | gi|1769783243|gb|CP042461.1| | 1862133 | g15578 | i0 | 93.976 | 237.93625498008 | 249 | 15 | 99 | 0 | 1 | 249 | 1249522 | 1249274 | Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome | blastn | 59722 | 377 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Gracilibacteria bacterium 28_42_T64 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;