RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1197996" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1197996 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1598413 1598413 PRJNA1197996_S_NODE_10622_length_328_cov_2.576471_g10568_i0 PRJNA1197996 10622 328 2.576471 8.45082488 Thenea valdiviae 1006815 Porifera other_Eukaryota 65.8 3.96e-6   NTclustered gi|2856876053|emb|OZ204154.1| 1006815 g10568 i0 85.714 0.192073170731707 63 8 19 1 2 63 10554 10616 Thenea valdiviae genome assembly, organelle: mitochondrion blastn 63 65.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Theneidae Thenea Thenea valdiviae
9252215 9252215 PRJNA1197996_S_NODE_5468_length_403_cov_4.124242_g5414_i0 PRJNA1197996 5468 403 4.124242 16.62069526 Sycon ciliatum 27933 Porifera other_Eukaryota 67.6 1.38e-6   NTclustered gi|2732925056|ref|XM_065329501.1| 27933 g5414 i0 100 0.612903225806452 36 0 9 0 260 295 2593 2558 PREDICTED: Sycon ciliatum uncharacterized LOC135816123 (LOC135816123), mRNA blastn 247 67.6 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;