RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1197996" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1197996 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2875033 2875033 PRJNA1197996_S_NODE_4683_length_422_cov_7.183381_g4629_i0 PRJNA1197996 4683 422 7.183381 30.31386782 Cystodiscus australis 1026752 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|331703988|gb|HQ822178.1| 1026752 g4629 i0 94.595 0.431279620853081 37 1 9 1 1 36 1356 1320 Cystodiscus australis isolate SMF7A12 28S large subunit ribosomal RNA gene, partial sequence blastn 182 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Cystodiscus Cystodiscus australis
10527566 10527566 PRJNA1197996_S_NODE_11989_length_316_cov_0.888889_g11935_i0 PRJNA1197996 11989 316 0.888889 2.80888924 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 62.1 4.92e-5   NTclustered gi|2782895370|ref|XM_067067234.1| 252671 g11935 i0 93.182 0.835443037974684 44 0 13 3 235 276 6834 6876 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136810661), transcript variant X5, mRNA blastn 264 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
18175824 18175824 PRJNA1197996_S_NODE_29095_length_234_cov_3.645963_g29041_i0 PRJNA1197996 29095 234 3.645963 8.53155342 Eunicella cavolini 317547 Cnidaria other_Eukaryota 104 5.7e-18   NTclustered gi|2918369535|emb|OZ237717.1| 317547 g29041 i0 89.157 2.59401709401709 83 9 37 0 51 133 10655078 10655160 Eunicella cavolini genome assembly, chromosome: 1 blastn 607 104 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;