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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA1197996" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA1197996 · 29 ✖

analysis 1

  • blastn · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
323908 323908 PRJNA1197996_S_NODE_15761_length_289_cov_1.444444_g15707_i0 PRJNA1197996 15761 289 1.444444 4.17444316 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 126 1.5499999999999998e-24   NTclustered gi|676383590|ref|XM_009036826.1| 44056 g15707 i0 89.109 0.754325259515571 101 11 35 0 133 233 1385 1285 Aureococcus anophagefferens hypothetical protein partial mRNA blastn 218 126 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
4871784 4871784 PRJNA1197996_S_NODE_364_length_1026_cov_1.997901_g335_i0 PRJNA1197996 364 1026 1.997901 20.49846426 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 1677 0   NTclustered gi|2248512796|ref|NC_063789.1| 272952 g335 i0 96.819 98.0672514619883 1006 28 98 2 1 1002 1028 23 Hyaloperonospora arabidopsidis isolate Noks1 mitochondrion, complete genome blastn 100617 1681 0.997620464009518 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora arabidopsidis
5427139 5427139 PRJNA1197996_S_NODE_17925_length_277_cov_1.509804_g17871_i0 PRJNA1197996 17925 277 1.509804 4.18215708 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 104 6.94e-18   NTclustered gi|859811083|gb|KM818001.1| 88167 g17871 i0 95.385 2.74368231046931 65 3 23 0 213 277 1633 1697 Poterioochromonas malhamensis strain SAG 933.1c 23S ribosomal RNA gene, partial sequence; plastid blastn 760 104 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
5427305 5427305 PRJNA1197996_S_NODE_24745_length_248_cov_2.137143_g24691_i0 PRJNA1197996 24745 248 2.137143 5.30011464 Spumella sinechrysos 2849684 SAR_Eukaryotes SAR_Eukaryotes 385 1.95e-102   NTclustered gi|2055919754|gb|MZ420312.1| 2849684 g24691 i0 95.436 97.0927419354839 241 11 97 0 1 241 1752 1512 Spumella sinechrysos strain Hwarim032418A7 large subunit ribosomal RNA gene, partial sequence blastn 24079 385 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sinechrysos
5427416 5427416 PRJNA1197996_S_NODE_29785_length_199_cov_4.309524_g29731_i0 PRJNA1197996 29785 199 4.309524 8.57595276 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 368 1.51e-97   NTclustered gi|567569843|gb|KF651120.1| 1432661 g29731 i0 100 99.8140703517588 199 0 100 0 1 199 1575 1377 Spumella sp. OF-40 clone 1 28S ribosomal RNA gene, partial sequence blastn 19863 368 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
7421453 7421453 PRJNA1197996_S_NODE_10246_length_332_cov_1.509653_g10192_i0 PRJNA1197996 10246 332 1.509653 5.01204796 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 67.6 1.12e-6   NTclustered gi|2795039260|ref|XM_067938436.1| 4785 g10192 i0 88.889 0.487951807228916 54 6 16 0 277 330 1719 1666 Phytophthora cinnamomi Translocation protein SEC63 (IUM83_13740), partial mRNA blastn 162 67.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
7977655 7977655 PRJNA1197996_S_NODE_5507_length_402_cov_3.659574_g5453_i0 PRJNA1197996 5507 402 3.659574 14.71148748 Pfiesteria piscicida 71001 SAR_Eukaryotes SAR_Eukaryotes 82.4 4.92e-11   NTclustered gi|112253201|gb|DQ864772.1| 71001 g5453 i0 85.897 0.388059701492537 78 9 19 2 321 397 589 513 Pfiesteria piscicida clone ppi-5p-3-3 mRNA sequence blastn 156 82.4 1 Eukaryota Sar     Dinophyceae Peridiniales Pfiesteriaceae Pfiesteria Pfiesteria piscicida
10527537 10527537 PRJNA1197996_S_NODE_1089_length_693_cov_5.490323_g1046_i0 PRJNA1197996 1089 693 5.490323 38.04793839 Berkeleya fennica 1577906 SAR_Eukaryotes SAR_Eukaryotes 86.1 6.82e-12   NTclustered gi|746001744|ref|NC_026126.1| 1577906 g1046 i0 86.842 3.16017316017316 76 10 11 0 557 632 34837 34762 Berkeleya fennica mitochondrion, complete genome blastn 2190 86.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Berkeleyaceae Berkeleya Berkeleya fennica
10528022 10528022 PRJNA1197996_S_NODE_3389_length_469_cov_7.752525_g3335_i0 PRJNA1197996 3389 469 7.752525 36.35934225 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 265 5.38e-66   NTclustered gi|657012511|gb|KF302595.1| 2850 g3335 i0 88.889 4.27078891257996 216 22 46 2 255 469 298 84 Phaeodactylum tricornutum clone C854 ubiquitin-ribosomal protein fusion S27a mRNA, partial cds blastn 2003 265 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
11802490 11802490 PRJNA1197996_S_NODE_19190_length_270_cov_3.111675_g19136_i0 PRJNA1197996 19190 270 3.111675 8.4015225 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 285 2.24e-72   NTclustered gi|2795032738|ref|XM_067933181.1| 4785 g19136 i0 87.967 93.1518518518518 241 29 89 0 1 241 751 991 Phytophthora cinnamomi Electron transfer flavoprotein subunit alpha, mitochondrial precursor (IUM83_08787), partial mRNA blastn 25151 285 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
11802733 11802733 PRJNA1197996_S_NODE_29390_length_228_cov_2.851613_g29336_i0 PRJNA1197996 29390 228 2.851613 6.50167764 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 172 1.5e-38   NTclustered gi|53829555|gb|AY582830.1| 289359 g29336 i0 97.98 17.1052631578947 99 2 43 0 130 228 1238 1140 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 3900 172 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
13077411 13077411 PRJNA1197996_S_NODE_1291_length_651_cov_24.697232_g1246_i0 PRJNA1197996 1291 651 24.697232 160.77898032 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 869 0   NTclustered gi|677286268|gb|KF997856.1| 1432661 g1246 i0 97.628 70.4961597542243 506 12 78 0 146 651 1357 852 Spumella sp. OF-40 translation elongation factor 1-alpha (EF1A) mRNA, complete cds blastn 45893 869 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
14352925 14352925 PRJNA1197996_S_NODE_1652_length_597_cov_7.496183_g1604_i0 PRJNA1197996 1652 597 7.496183 44.75221251 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 974 0   NTclustered gi|2651357788|gb|PP174303.1| 41631 g1604 i0 97.222 87.5896147403685 576 14 96 1 24 597 1840 2415 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 52291 974 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
15071402 15071402 PRJNA1197996_S_NODE_3652_length_458_cov_4.150649_g3598_i0 PRJNA1197996 3652 458 4.150649 19.00997242 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 704 0   NTclustered gi|161015549|gb|EF577176.1| 373018 g3598 i0 94.565 54.8515283842795 460 18 100 6 1 458 637 183 Spumella-like flagellate 1006 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25122 706 0.997167138810198 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae   Spumella-like flagellate 1006
15071406 15071406 PRJNA1197996_S_NODE_4412_length_431_cov_4.041899_g4358_i0 PRJNA1197996 4412 431 4.041899 17.42058469 Chromulinaceae 98651 SAR_Eukaryotes SAR_Eukaryotes 769 0   NTclustered gi|685431574|gb|KF697333.1| 1117030 g4358 i0 98.84 99.0371229698376 431 5 100 0 1 431 702 272 Pedospumella encystans strain 1006 28S ribosomal RNA gene, partial sequence blastn 42685 774 0.993540051679587 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Pedospumella Pedospumella encystans
15626780 15626780 PRJNA1197996_S_NODE_1933_length_564_cov_2.712831_g1883_i0 PRJNA1197996 1933 564 2.712831 15.30036684 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 281 6.51e-71   NTclustered gi|11465862|ref|NC_002571.1| 2986 g1883 i0 76.923 28.5921985815603 546 94 95 21 2 537 32312 31789 Ochromonas danica mitochondrion, complete genome blastn 16126 281 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
16900949 16900949 PRJNA1197996_S_NODE_1254_length_659_cov_4.068259_g1209_i0 PRJNA1197996 1254 659 4.068259 26.80982681 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 604 4.019999999999999e-168   NTclustered gi|657012562|gb|KF302618.1| 2850 g1209 i0 88.956 51.2352048558422 498 44 75 7 166 656 21 514 Phaeodactylum tricornutum clone C537 hypothetical protein mRNA, complete cds blastn 33764 604 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
16901051 16901051 PRJNA1197996_S_NODE_16894_length_283_cov_1.042857_g16840_i0 PRJNA1197996 16894 283 1.042857 2.95128531 Suigetsumonas keniensis 2810150 SAR_Eukaryotes SAR_Eukaryotes 148 3.2399999999999996e-31   NTclustered gi|2163288173|gb|MZ440338.1| 2810150 g16840 i0 92.308 24.660777385159 104 8 37 0 6 109 1879 1982 Suigetsumonas keniensis strain HFCC1412 heat-shock protein 90 (hsp90) mRNA, complete cds blastn 6979 148 1 Eukaryota Sar     Bigyra Placidida   Suigetsumonas Suigetsumonas keniensis
16901481 16901481 PRJNA1197996_S_NODE_7614_length_364_cov_2.061856_g7560_i0 PRJNA1197996 7614 364 2.061856 7.50515584 Ochromonas sp. CCMP1393 420556 SAR_Eukaryotes SAR_Eukaryotes 287 8.7e-73   NTclustered gi|679091872|gb|KJ877675.1| 420556 g7560 i0 82.254 91.5769230769231 355 42 96 10 2 352 36497 36160 Ochromonas sp. CCMP1393 plastid, complete genome blastn 33334 287 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas sp. CCMP1393
19450005 19450005 PRJNA1197996_S_NODE_19396_length_269_cov_2.397959_g19342_i0 PRJNA1197996 19396 269 2.397959 6.45050971 Ochromonas sp. CCMP1393 420556 SAR_Eukaryotes SAR_Eukaryotes 281 2.89e-71   NTclustered gi|679091872|gb|KJ877675.1| 420556 g19342 i0 86.415 72.2193308550186 265 26 95 6 14 269 35910 36173 Ochromonas sp. CCMP1393 plastid, complete genome blastn 19427 281 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas sp. CCMP1393
20169932 20169932 PRJNA1197996_S_NODE_29556_length_223_cov_4.826667_g29502_i0 PRJNA1197996 29556 223 4.826667 10.76346741 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 372 1.34e-98   NTclustered gi|7328327|emb|AJ236859.1| 89044 g29502 i0 99.038 92.8520179372197 208 1 93 1 1 208 292 86 Spumella elongata 18S rDNA gene blastn 20706 372 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella elongata
20725463 20725463 PRJNA1197996_S_NODE_25677_length_246_cov_6.086705_g25623_i0 PRJNA1197996 25677 246 6.086705 14.9732943 Spumella sinechrysos 2849684 SAR_Eukaryotes SAR_Eukaryotes 329 9.17e-86   NTclustered gi|2055919754|gb|MZ420312.1| 2849684 g25623 i0 91.057 101.288617886179 246 18 100 2 1 246 1731 1972 Spumella sinechrysos strain Hwarim032418A7 large subunit ribosomal RNA gene, partial sequence blastn 24917 329 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sinechrysos
22000593 22000593 PRJNA1197996_S_NODE_1378_length_636_cov_10.371226_g1332_i0 PRJNA1197996 1378 636 10.371226 65.96099736 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 403 1.5099999999999994e-107   NTclustered gi|657012465|gb|KF302574.1| 2850 g1332 i0 87.791 36.187106918239 344 42 54 0 122 465 344 1 Phaeodactylum tricornutum clone C567 ribosomal protein mRNA, partial cds blastn 23015 403 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
22000618 22000618 PRJNA1197996_S_NODE_15258_length_292_cov_2.310502_g15204_i0 PRJNA1197996 15258 292 2.310502 6.74666584 Peronospora aff. claytoniae 2028483 SAR_Eukaryotes SAR_Eukaryotes 464 2.93e-126   NTclustered gi|1235732001|gb|MF693904.1| 2028483 g15204 i0 98.846 88.8664383561644 260 3 89 0 32 291 1 260 Peronospora aff. claytoniae isolate RC16DM3 large subunit ribosomal RNA gene, partial sequence blastn 25949 464 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora aff. claytoniae
22000698 22000698 PRJNA1197996_S_NODE_18598_length_273_cov_19.595000_g18544_i0 PRJNA1197996 18598 273 19.595 53.49435 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 505 1.6e-138   NTclustered gi|567569843|gb|KF651120.1| 1432661 g18544 i0 100 96.6593406593407 273 0 100 0 1 273 41 313 Spumella sp. OF-40 clone 1 28S ribosomal RNA gene, partial sequence blastn 26388 505 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
22000947 22000947 PRJNA1197996_S_NODE_29298_length_230_cov_3.114650_g29244_i0 PRJNA1197996 29298 230 3.11465 7.163695 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 368 1.7999999999999995e-97   NTclustered gi|567569844|gb|KF651121.1| 1432661 g29244 i0 100 87.704347826087 199 0 87 0 1 199 521 323 Spumella sp. OF-40 clone 2 28S ribosomal RNA gene, partial sequence blastn 20172 368 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
23276533 23276533 PRJNA1197996_S_NODE_7799_length_361_cov_1.822917_g7745_i0 PRJNA1197996 7799 361 1.822917 6.58073037 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 416 1.05e-111   NTclustered gi|53829571|gb|AY582838.1| 289359 g7745 i0 97.154 63.6149584487535 246 7 68 0 116 361 1026 781 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 HSP70 gene, partial cds blastn 22965 416 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
23276572 23276572 PRJNA1197996_S_NODE_9239_length_342_cov_2.869888_g9185_i0 PRJNA1197996 9239 342 2.869888 9.81501696 Tribonema minus 303371 SAR_Eukaryotes SAR_Eukaryotes 128 5.22e-25   NTclustered gi|2752714478|gb|PP910185.1| 303371 g9185 i0 91.398 1.14619883040936 93 8 27 0 209 301 5502 5410 Tribonema minus voucher SAG 880-3 heat shock protein 70A gene, complete cds blastn 392 128 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
25269901 25269901 PRJNA1197996_S_NODE_4940_length_415_cov_36.730994_g4886_i0 PRJNA1197996 4940 415 36.730994 152.4336251 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 761 0   NTclustered gi|269993986|dbj|AB520724.1| 183512 g4886 i0 99.759 99.8626506024096 415 1 100 0 1 415 888 474 Uncultured chrysophyte gene for 18S ribosomal RNA, partial sequence, clone: 10182008-Euk18S-Clone9 blastn 41443 761 1 Eukaryota Sar     Chrysophyceae       uncultured Chrysophyceae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;