contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1197996" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324173 | 324173 | PRJNA1197996_S_NODE_26861_length_244_cov_1.350877_g26807_i0 | PRJNA1197996 | 26861 | 244 | 1.350877 | 3.29613988 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 379 | 8.889999999999998e-101 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g26807 | i0 | 94.672 | 145.196721311475 | 244 | 13 | 100 | 0 | 1 | 244 | 654211 | 654454 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 35428 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 1598715 | 1598715 | PRJNA1197996_S_NODE_22842_length_254_cov_0.856354_g22788_i0 | PRJNA1197996 | 22842 | 254 | 0.856354 | 2.17513916 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 453 | 5.41e-123 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g22788 | i0 | 98.819 | 133.897637795276 | 254 | 3 | 100 | 0 | 1 | 254 | 573 | 320 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 34010 | 453 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 4871763 | 4871763 | PRJNA1197996_S_NODE_2744_length_503_cov_1.786047_g2692_i0 | PRJNA1197996 | 2744 | 503 | 1.786047 | 8.98381641 | Bremerella | 2714594 | Bacteria | Bacteria | 381 | 5.519999999999999e-101 | NTclustered | gi|1712647354|gb|CP036289.1| | 2527984 | g2692 | i0 | 81.857 | 448.900596421471 | 474 | 67 | 92 | 17 | 4 | 465 | 2674640 | 2674174 | Bremerella volcania strain Pan97 chromosome, complete genome | blastn | 225797 | 381 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella volcania | |
| 5427241 | 5427241 | PRJNA1197996_S_NODE_21825_length_258_cov_1.578378_g21771_i0 | PRJNA1197996 | 21825 | 258 | 1.578378 | 4.07221524 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 287 | 5.910000000000001e-73 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g21771 | i0 | 87.121 | 166.562015503876 | 264 | 20 | 99 | 9 | 4 | 258 | 7051284 | 7051542 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 42973 | 287 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 6146529 | 6146529 | PRJNA1197996_S_NODE_665_length_820_cov_4.752343_g630_i0 | PRJNA1197996 | 665 | 820 | 4.752343 | 38.9692126 | Planctomycetia | 203683 | Bacteria | Bacteria | 1482 | 0 | NTclustered | gi|10436091|gb|AF239696.1|AF239696 | 121118 | g630 | i0 | 99.269 | 118.723170731707 | 821 | 4 | 100 | 2 | 1 | 820 | 39 | 858 | Gemmata-like str. JW11-2f5 16S ribosomal RNA gene, partial sequence | blastn | 97353 | 1482 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gemmata-like str. JW11-2f5 | ||
| 7421592 | 7421592 | PRJNA1197996_S_NODE_5606_length_400_cov_3.318043_g5552_i0 | PRJNA1197996 | 5606 | 400 | 3.318043 | 13.272172 | Zavarzinella | 600332 | Bacteria | Bacteria | 712 | 0 | NTclustered | gi|576901496|gb|KF827089.1| | 120965 | g5552 | i0 | 98.75 | 98.0625 | 400 | 5 | 100 | 0 | 1 | 400 | 787 | 388 | Uncultured planctomycete clone C-5-14 16S ribosomal RNA gene, partial sequence | blastn | 39225 | 712 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 10527842 | 10527842 | PRJNA1197996_S_NODE_22569_length_255_cov_1.159341_g22515_i0 | PRJNA1197996 | 22569 | 255 | 1.159341 | 2.95631955 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 350 | 7.34e-92 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g22515 | i0 | 91.373 | 423.152941176471 | 255 | 22 | 100 | 0 | 1 | 255 | 2583676 | 2583930 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 107904 | 350 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 11802705 | 11802705 | PRJNA1197996_S_NODE_28350_length_241_cov_1.482143_g28296_i0 | PRJNA1197996 | 28350 | 241 | 1.482143 | 3.57196463 | Limnoglobus roseus | 2598579 | Bacteria | Bacteria | 309 | 1.17e-79 | NTclustered | gi|1733446852|gb|CP042425.1| | 2598579 | g28296 | i0 | 90.417 | 158.709543568465 | 240 | 16 | 98 | 7 | 5 | 241 | 2956646 | 2956411 | Limnoglobus roseus strain PX52 chromosome, complete genome | blastn | 38249 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Limnoglobus | Limnoglobus roseus | |
| 14353340 | 14353340 | PRJNA1197996_S_NODE_7932_length_359_cov_1.527972_g7878_i0 | PRJNA1197996 | 7932 | 359 | 1.527972 | 5.48541948 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 132 | 4.25e-26 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g7878 | i0 | 84.962 | 2.78551532033426 | 133 | 17 | 36 | 3 | 156 | 286 | 1592840 | 1592971 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 1000 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 15071405 | 15071405 | PRJNA1197996_S_NODE_4032_length_444_cov_2.601078_g3978_i0 | PRJNA1197996 | 4032 | 444 | 2.601078 | 11.54878632 | Gemmata | 113 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g3978 | i0 | 95.045 | 171.369369369369 | 444 | 22 | 100 | 0 | 1 | 444 | 2327 | 1884 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 76088 | 699 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 15626665 | 15626665 | PRJNA1197996_S_NODE_14053_length_300_cov_1.696035_g13999_i0 | PRJNA1197996 | 14053 | 300 | 1.696035 | 5.088105 | Candidatus Rubidus massiliensis | 1444712 | Bacteria | Bacteria | 555 | 1.7399999999999995e-153 | NTclustered | gi|565666443|emb|HG726047.1| | 1444712 | g13999 | i0 | 100 | 107.84 | 300 | 0 | 100 | 0 | 1 | 300 | 583 | 284 | Candidatus Rubidus massiliensis partial 16S rRNA gene, strain Rubis | blastn | 32352 | 555 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Candidatus Rubidus | Candidatus Rubidus massiliensis | |
| 23276270 | 23276270 | PRJNA1197996_S_NODE_22679_length_254_cov_1.784530_g22625_i0 | PRJNA1197996 | 22679 | 254 | 1.78453 | 4.5327062 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 305 | 1.6e-78 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g22625 | i0 | 88.627 | 161.606299212598 | 255 | 23 | 99 | 5 | 1 | 251 | 7052246 | 7052498 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 41048 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;