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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196438 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7976682 7976682 PRJNA1196438_P_NODE_57767_length_261_cov_2.776596_g57340_i0 PRJNA1196438 57767 261 2.776596 7.24691556 Chthoniobacter flavus 191863 Bacteria Bacteria 333 7.589999999999999e-87   NTclustered gi|183579828|emb|AM905425.1| 497964 g57340 i0 89.734 269.735632183908 263 23 100 4 1 261 1972 2232 Chthoniobacter flavus 23S rRNA gene, strain Ellin428 blastn 70401 333 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
11801408 11801408 PRJNA1196438_P_NODE_15730_length_312_cov_3.912134_g15304_i0 PRJNA1196438 15730 312 3.912134 12.20585808 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 67.6 1.04e-6   NTclustered gi|2022020957|gb|CP059069.1| 2562705 g15304 i0 85.714 1.01923076923077 63 9 20 0 218 280 3176310 3176372 Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome blastn 318 67.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
15625657 15625657 PRJNA1196438_P_NODE_14793_length_312_cov_4.280335_g14367_i0 PRJNA1196438 14793 312 4.280335 13.3546452 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 233 9.71e-57   NTclustered gi|2874253768|emb|OY969715.1| 412056 g14367 i0 94.667 94.9839743589744 150 8 76 0 162 311 915059 914910 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 blastn 29635 233 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
15626218 15626218 PRJNA1196438_P_NODE_66313_length_251_cov_0.876404_g65886_i0 PRJNA1196438 66313 251 0.876404 2.19977404 Opitutus terrae 107709 Bacteria Bacteria 130 1.02e-25   NTclustered gi|177839040|gb|CP001032.1| 452637 g65886 i0 95.122 0.653386454183267 82 4 33 0 170 251 3854930 3854849 Opitutus terrae PB90-1, complete genome blastn 164 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
18175000 18175000 PRJNA1196438_P_NODE_62855_length_254_cov_1.723757_g62428_i0 PRJNA1196438 62855 254 1.723757 4.37834278 Luteolibacter ambystomatis 2824561 Bacteria Bacteria 163 1.02e-35   NTclustered gi|2029343589|gb|CP073100.1| 2824561 g62428 i0 86.897 8.89370078740157 145 19 57 0 109 253 3202267 3202123 Luteolibacter ambystomatis strain 32A chromosome, complete genome blastn 2259 163 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter ambystomatis
20724313 20724313 PRJNA1196438_P_NODE_2637_length_596_cov_5.135755_g2238_i0 PRJNA1196438 2637 596 5.135755 30.6090998 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 900 0   NTclustered gi|2813917447|gb|CP170506.1| 2811408 g2238 i0 93.96 264.785234899329 596 35 100 1 1 596 3046257 3046851 MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome blastn 157812 900 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
21999943 21999943 PRJNA1196438_P_NODE_4678_length_456_cov_7.422977_g4260_i0 PRJNA1196438 4678 456 7.422977 33.84877512 Sulfuriroseicoccus oceanibius 2707525 Bacteria Bacteria 326 2.36e-84   NTclustered gi|1953472588|gb|CP066776.1| 2707525 g4260 i0 88.561 73.2456140350877 271 28 98 3 1 271 3450453 3450186 Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome blastn 33400 326 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Sulfuriroseicoccus Sulfuriroseicoccus oceanibius
23275910 23275910 PRJNA1196438_P_NODE_86059_length_210_cov_8.810219_g85631_i0 PRJNA1196438 86059 210 8.810219 18.5014599 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 226 1.0299999999999999e-54   NTclustered gi|2874253952|emb|OY970277.1| 412056 g85631 i0 86.603 56.3333333333333 209 23 99 5 2 208 2749803 2750008 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 blastn 11830 226 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;