RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196438 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
323267 323267 PRJNA1196438_P_NODE_51781_length_270_cov_2.832487_g51354_i0 PRJNA1196438 51781 270 2.832487 7.6477149 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 255 1.76e-63   NTclustered gi|2522768008|gb|OR162445.1| 646526 g51354 i0 91.005 2.48148148148148 189 17 70 0 60 248 2280 2468 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 670 255 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
2874157 2874157 PRJNA1196438_P_NODE_6263_length_402_cov_3.711246_g5841_i0 PRJNA1196438 6263 402 3.711246 14.91920892 Ecytonucleospora nucleophila 1295219 Fungi Fungi 536 8.729999999999998e-148   NTclustered gi|529283990|gb|KF135643.1| 1295219 g5841 i0 90.977 88.2014925373134 399 34 99 2 1 398 897 1294 Enterospora nucleophila isolate ENTA2 small subunit ribosomal RNA gene, partial sequence blastn 35457 536 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora nucleophila
7976315 7976315 PRJNA1196438_P_NODE_25887_length_303_cov_2.839130_g25461_i0 PRJNA1196438 25887 303 2.83913 8.6025639 Enterocytozoon sp. ex Acetes sibogae australis 2881109 Fungi Fungi 385 2.45e-102   NTclustered gi|2108103202|gb|OK413268.1| 2881109 g25461 i0 89.769 99.6534653465347 303 27 99 3 1 301 791 491 Enterocytozoon sp. ex Acetes sibogae australis isolate RA19015_21 small subunit ribosomal RNA gene, partial sequence blastn 30195 385 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon sp. ex Acetes sibogae australis
16900165 16900165 PRJNA1196438_P_NODE_3714_length_506_cov_3.729792_g3303_i0 PRJNA1196438 3714 506 3.729792 18.87274752 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 484 4.1199999999999996e-132   NTclustered gi|2522768008|gb|OR162445.1| 646526 g3303 i0 84.569 6.74110671936759 499 65 97 12 14 506 1729 2221 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3411 484 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
24549108 24549108 PRJNA1196438_P_NODE_2680_length_592_cov_3.181118_g2279_i0 PRJNA1196438 2680 592 3.181118 18.83221856 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 422 3.87e-113   NTclustered gi|2522768008|gb|OR162445.1| 646526 g2279 i0 95.472 14.6570945945946 265 11 82 1 328 591 3206 3470 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8677 422 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;