contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_phylum = "Cossaviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6701509 | 6701509 | PRJNA1196438_P_NODE_79866_length_234_cov_2.869565_g79439_i0 | PRJNA1196438 | 79866 | 234 | 2.869565 | 6.7147821 | Betapapillomavirus 1 | 337051 | Viruses | Viruses | 431 | 2.3e-116 | NTclustered | gi|1200175664|gb|KY969593.1| | 31547 | g79439 | i0 | 100 | 5.4017094017094 | 233 | 0 | 99 | 0 | 2 | 234 | 7512 | 7280 | Human papillomavirus 20 strain HPV-20/Lancaster/2015, complete genome | blastn | 1264 | 431 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Betapapillomavirus | Betapapillomavirus 1 | ||
| 13076998 | 13076998 | PRJNA1196438_P_NODE_63451_length_253_cov_2.177778_g63024_i0 | PRJNA1196438 | 63451 | 253 | 2.177778 | 5.50977834 | Betapolyomavirus macacae | 1891767 | Viruses | Viruses | 152 | 2.1999999999999994e-32 | NTclustered | gi|156598992|gb|EF579658.1| | 1891767 | g63024 | i0 | 80.882 | 0.806324110671937 | 204 | 30 | 81 | 5 | 1 | 204 | 2491 | 2685 | Simian virus 40 isolate SV40(Ad)191, complete genome | blastn | 204 | 152 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Sepolyvirales | Polyomaviridae | Betapolyomavirus | Betapolyomavirus macacae | ||
| 20724722 | 20724722 | PRJNA1196438_P_NODE_61877_length_255_cov_2.714286_g61450_i0 | PRJNA1196438 | 61877 | 255 | 2.714286 | 6.9214293 | Alphapolyomavirus quintihominis | 1891726 | Viruses | Viruses | 472 | 1.5e-128 | NTclustered | gi|293595984|gb|HM011552.1| | 493803 | g61450 | i0 | 100 | 100 | 255 | 0 | 100 | 0 | 1 | 255 | 1655 | 1909 | Merkel cell polyomavirus isolate 25b, complete genome | blastn | 25500 | 472 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Sepolyvirales | Polyomaviridae | Alphapolyomavirus | Alphapolyomavirus quintihominis | ||
| 22720109 | 22720109 | PRJNA1196438_P_NODE_27198_length_301_cov_4.614035_g26772_i0 | PRJNA1196438 | 27198 | 301 | 4.614035 | 13.88824535 | Gammapapillomavirus | 325455 | Viruses | Viruses | 279 | 1.18e-70 | NTclustered | gi|1559669533|gb|MH777373.2| | 10566 | g26772 | i0 | 100 | 2.97009966777409 | 151 | 0 | 99 | 0 | 2 | 152 | 2856 | 3006 | MAG: Human papillomavirus isolate HPV-mSK_234, complete genome | blastn | 894 | 279 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 22720364 | 22720364 | PRJNA1196438_P_NODE_84198_length_222_cov_6.302013_g83771_i0 | PRJNA1196438 | 84198 | 222 | 6.302013 | 13.99046886 | Betapapillomavirus | 333922 | Viruses | Viruses | 411 | 2.8199999999999996e-110 | NTclustered | gi|1273499018|gb|MF588680.1| | 333924 | g83771 | i0 | 100 | 10.009009009009 | 222 | 0 | 100 | 0 | 1 | 222 | 748 | 527 | Betapapillomavirus 2 isolate Beta02_LCOSOc207, complete genome | blastn | 2222 | 411 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Betapapillomavirus | Betapapillomavirus 2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;