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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1196438 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4150273 4150273 PRJNA1196438_P_NODE_61324_length_256_cov_2.256831_g60897_i0 PRJNA1196438 61324 256 2.256831 5.77748736 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 172 1.71e-38   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g60897 i0 80.172 0.90625 232 44 90 2 24 254 643557 643327 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 232 172 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
4150593 4150593 PRJNA1196438_P_NODE_85764_length_212_cov_5.266187_g85336_i0 PRJNA1196438 85764 212 5.266187 11.16431644 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 187 4.9e-43   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g85336 i0 94.355 3.2122641509434 124 4 57 3 2 122 1207363 1207240 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 681 187 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
24549799 24549799 PRJNA1196438_P_NODE_81220_length_231_cov_2.949367_g80793_i0 PRJNA1196438 81220 231 2.949367 6.81303777 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 115 2.6e-21   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g80793 i0 91.566 0.359307359307359 83 7 36 0 148 230 1603096 1603014 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 83 115 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;