RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA1196438 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1598056 1598056 PRJNA1196438_P_NODE_65122_length_252_cov_0.871508_g64695_i0 PRJNA1196438 65122 252 0.871508 2.19620016 Inoviridae sp. 2219103 Viruses Viruses 466 6.89e-127   NTclustered gi|2056968978|tpg|BK023083.1| 2219103 g64695 i0 100 8.37698412698413 252 0 100 0 1 252 2590 2841 MAG TPA_asm: Inoviridae sp. isolate ctgha17, partial genome blastn 2111 466 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14352113 14352113 PRJNA1196438_P_NODE_41172_length_287_cov_1.836449_g40745_i0 PRJNA1196438 41172 287 1.836449 5.27060863 Inoviridae sp. 2219103 Viruses Viruses 499 7.88e-137   NTclustered gi|2056883065|tpg|BK053528.1| 2219103 g40745 i0 98.582 5.93379790940767 282 4 98 0 1 282 10245 10526 MAG TPA_asm: Inoviridae sp. isolate ctWfi4, partial genome blastn 1703 499 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
16900157 16900157 PRJNA1196438_P_NODE_36594_length_294_cov_2.438914_g36168_i0 PRJNA1196438 36594 294 2.438914 7.17040716 Inoviridae sp. 2219103 Viruses Viruses 141 5.66e-29   NTclustered gi|2059758042|tpg|BK028106.1| 2219103 g36168 i0 88.696 0.391156462585034 115 13 39 0 174 288 720 606 MAG TPA_asm: Inoviridae sp. isolate ctbXF9, partial genome blastn 115 141 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;