contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1597986 | 1597986 | PRJNA1196438_P_NODE_60662_length_257_cov_2.239130_g60235_i0 | PRJNA1196438 | 60662 | 257 | 2.23913 | 5.7545641 | Candidatus Piscichlamydia sp. | 1977145 | Bacteria | Bacteria | 436 | 5.52e-118 | NTclustered | gi|1175896721|gb|KY380088.1| | 1977145 | g60235 | i0 | 98.776 | 95.8287937743191 | 245 | 3 | 95 | 0 | 13 | 257 | 403 | 647 | Candidatus Piscichlamydia sp. strain EP 16S ribosomal RNA gene, partial sequence | blastn | 24628 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Piscichlamydiaceae | Candidatus Piscichlamydia | Candidatus Piscichlamydia sp. | |
| 3593878 | 3593878 | PRJNA1196438_P_NODE_67983_length_249_cov_1.750000_g67556_i0 | PRJNA1196438 | 67983 | 249 | 1.75 | 4.3575 | PVC group | 1783257 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|337292513|emb|FR872621.1| | 765953 | g67556 | i0 | 100 | 60.9718875502008 | 249 | 0 | 100 | 0 | 1 | 249 | 1456 | 1208 | Waddlia chondrophila 2032/99 annotated genome fragment, clone 1103163150273 | blastn | 15182 | 460 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 4149900 | 4149900 | PRJNA1196438_P_NODE_31204_length_300_cov_5.911894_g30778_i0 | PRJNA1196438 | 31204 | 300 | 5.911894 | 17.735682 | Lacipirellula limnantheis | 2528024 | Bacteria | Bacteria | 470 | 6.5e-128 | NTclustered | gi|1712529062|gb|CP036339.1| | 2528024 | g30778 | i0 | 95 | 1 | 300 | 14 | 100 | 1 | 1 | 300 | 5899736 | 5900034 | Lacipirellula limnantheis strain I41 chromosome | blastn | 300 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula limnantheis | |
| 7976682 | 7976682 | PRJNA1196438_P_NODE_57767_length_261_cov_2.776596_g57340_i0 | PRJNA1196438 | 57767 | 261 | 2.776596 | 7.24691556 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 333 | 7.589999999999999e-87 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g57340 | i0 | 89.734 | 269.735632183908 | 263 | 23 | 100 | 4 | 1 | 261 | 1972 | 2232 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 70401 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 9251149 | 9251149 | PRJNA1196438_P_NODE_50968_length_271_cov_4.065657_g50541_i0 | PRJNA1196438 | 50968 | 271 | 4.065657 | 11.01793047 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 279 | 1.05e-70 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g50541 | i0 | 85.24 | 2.77121771217712 | 271 | 40 | 100 | 0 | 1 | 271 | 5818583 | 5818313 | Planctomyces sp. SH-PL62, complete genome | blastn | 751 | 279 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 11801408 | 11801408 | PRJNA1196438_P_NODE_15730_length_312_cov_3.912134_g15304_i0 | PRJNA1196438 | 15730 | 312 | 3.912134 | 12.20585808 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 67.6 | 1.04e-6 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g15304 | i0 | 85.714 | 1.01923076923077 | 63 | 9 | 20 | 0 | 218 | 280 | 3176310 | 3176372 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 318 | 67.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 12522067 | 12522067 | PRJNA1196438_P_NODE_59490_length_259_cov_1.672043_g59063_i0 | PRJNA1196438 | 59490 | 259 | 1.672043 | 4.33059137 | Neochlamydia | 112987 | Bacteria | Bacteria | 289 | 1.65e-73 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g59063 | i0 | 86.923 | 186.393822393822 | 260 | 30 | 99 | 4 | 2 | 259 | 1439 | 1182 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 48276 | 291 | 0.993127147766323 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 13796662 | 13796662 | PRJNA1196438_P_NODE_36791_length_294_cov_1.945701_g36365_i0 | PRJNA1196438 | 36791 | 294 | 1.945701 | 5.72036094 | Rubinisphaera | 1649490 | Bacteria | Bacteria | 425 | 1.39e-114 | NTclustered | gi|470488120|ref|NR_076852.1| | 119 | g36365 | i0 | 97.581 | 165.520408163265 | 248 | 6 | 84 | 0 | 46 | 293 | 2038 | 2285 | Planctomyces brasiliensis strain DSM 5305 23S ribosomal RNA gene, complete sequence | blastn | 48663 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Rubinisphaera | Rubinisphaera brasiliensis | |
| 14352177 | 14352177 | PRJNA1196438_P_NODE_46092_length_279_cov_2.165049_g45665_i0 | PRJNA1196438 | 46092 | 279 | 2.165049 | 6.04048671 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 276 | 1.4e-69 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g45665 | i0 | 86.454 | 1.61290322580645 | 251 | 34 | 96 | 0 | 29 | 279 | 4292957 | 4293207 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 450 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 15625657 | 15625657 | PRJNA1196438_P_NODE_14793_length_312_cov_4.280335_g14367_i0 | PRJNA1196438 | 14793 | 312 | 4.280335 | 13.3546452 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 233 | 9.71e-57 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g14367 | i0 | 94.667 | 94.9839743589744 | 150 | 8 | 76 | 0 | 162 | 311 | 915059 | 914910 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 29635 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15625934 | 15625934 | PRJNA1196438_P_NODE_44613_length_281_cov_4.019231_g44186_i0 | PRJNA1196438 | 44613 | 281 | 4.0192310000000004 | 11.29403911 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 143 | 1.49e-29 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g44186 | i0 | 79.476 | 0.814946619217082 | 229 | 25 | 76 | 10 | 1 | 213 | 73547 | 73325 | Planctomyces sp. SH-PL62, complete genome | blastn | 229 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 15626218 | 15626218 | PRJNA1196438_P_NODE_66313_length_251_cov_0.876404_g65886_i0 | PRJNA1196438 | 66313 | 251 | 0.876404 | 2.19977404 | Opitutus terrae | 107709 | Bacteria | Bacteria | 130 | 1.02e-25 | NTclustered | gi|177839040|gb|CP001032.1| | 452637 | g65886 | i0 | 95.122 | 0.653386454183267 | 82 | 4 | 33 | 0 | 170 | 251 | 3854930 | 3854849 | Opitutus terrae PB90-1, complete genome | blastn | 164 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 18174472 | 18174472 | PRJNA1196438_P_NODE_10635_length_326_cov_2.339921_g10209_i0 | PRJNA1196438 | 10635 | 326 | 2.339921 | 7.62814246 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 318 | 2.74e-82 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g10209 | i0 | 84.848 | 119.546012269939 | 330 | 34 | 99 | 14 | 1 | 325 | 653427 | 653745 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 38972 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 18174920 | 18174920 | PRJNA1196438_P_NODE_57235_length_262_cov_2.227513_g56808_i0 | PRJNA1196438 | 57235 | 262 | 2.227513 | 5.83608406 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 224 | 4.789999999999999e-54 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g56808 | i0 | 82.129 | 3.72900763358779 | 263 | 45 | 100 | 2 | 1 | 262 | 2741447 | 2741708 | Planctomyces sp. SH-PL62, complete genome | blastn | 977 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 18175000 | 18175000 | PRJNA1196438_P_NODE_62855_length_254_cov_1.723757_g62428_i0 | PRJNA1196438 | 62855 | 254 | 1.723757 | 4.37834278 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 163 | 1.02e-35 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g62428 | i0 | 86.897 | 8.89370078740157 | 145 | 19 | 57 | 0 | 109 | 253 | 3202267 | 3202123 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 2259 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 19449282 | 19449282 | PRJNA1196438_P_NODE_52216_length_270_cov_1.482234_g51789_i0 | PRJNA1196438 | 52216 | 270 | 1.482234 | 4.0020318 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 379 | 9.989999999999998e-101 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g51789 | i0 | 91.912 | 273.377777777778 | 272 | 20 | 100 | 2 | 1 | 270 | 4422000 | 4422271 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 73812 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 20724313 | 20724313 | PRJNA1196438_P_NODE_2637_length_596_cov_5.135755_g2238_i0 | PRJNA1196438 | 2637 | 596 | 5.135755 | 30.6090998 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 900 | 0 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g2238 | i0 | 93.96 | 264.785234899329 | 596 | 35 | 100 | 1 | 1 | 596 | 3046257 | 3046851 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 157812 | 900 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 21999943 | 21999943 | PRJNA1196438_P_NODE_4678_length_456_cov_7.422977_g4260_i0 | PRJNA1196438 | 4678 | 456 | 7.422977 | 33.84877512 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 326 | 2.36e-84 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g4260 | i0 | 88.561 | 73.2456140350877 | 271 | 28 | 98 | 3 | 1 | 271 | 3450453 | 3450186 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 33400 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 23275910 | 23275910 | PRJNA1196438_P_NODE_86059_length_210_cov_8.810219_g85631_i0 | PRJNA1196438 | 86059 | 210 | 8.810219 | 18.5014599 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 226 | 1.0299999999999999e-54 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g85631 | i0 | 86.603 | 56.3333333333333 | 209 | 23 | 99 | 5 | 2 | 208 | 2749803 | 2750008 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 11830 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;