contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA1196438" and tax_clade = "Bacteria candidate phyla"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2874123 | 2874123 | PRJNA1196438_P_NODE_60543_length_257_cov_2.543478_g60116_i0 | PRJNA1196438 | 60543 | 257 | 2.543478 | 6.53673846 | Candidatus Nanosynbacter sp. BB002 | 3393757 | Bacteria | Bacteria | 137 | 6.27e-28 | NTclustered | gi|2692798772|gb|CP146064.1| | 3393757 | g60116 | i0 | 77.729 | 0.891050583657588 | 229 | 47 | 88 | 4 | 5 | 231 | 491411 | 491637 | Candidatus Nanosynbacter sp. BB002 chromosome, complete genome | blastn | 229 | 137 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. BB002 | ||
| 4149804 | 4149804 | PRJNA1196438_P_NODE_15124_length_312_cov_4.142259_g14698_i0 | PRJNA1196438 | 15124 | 312 | 4.142259 | 12.92384808 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 268 | 2.66e-67 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g14698 | i0 | 98.675 | 0.967948717948718 | 151 | 2 | 97 | 0 | 1 | 151 | 210244 | 210394 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 302 | 268 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 4149825 | 4149825 | PRJNA1196438_P_NODE_19244_length_312_cov_3.138075_g18818_i0 | PRJNA1196438 | 19244 | 312 | 3.138075 | 9.790794 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 451 | 2.46e-122 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g18818 | i0 | 91.212 | 1.05769230769231 | 330 | 11 | 100 | 1 | 1 | 312 | 97586 | 97257 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 330 | 451 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 5426090 | 5426090 | PRJNA1196438_P_NODE_20125_length_312_cov_3.012552_g19699_i0 | PRJNA1196438 | 20125 | 312 | 3.012552 | 9.39916224 | Candidatus Saccharibacteria bacterium oral taxon 488 | 713059 | Bacteria | Bacteria | 132 | 3.64e-26 | NTclustered | gi|1805657665|gb|CP047917.1| | 713059 | g19699 | i0 | 88.785 | 3.58974358974359 | 107 | 12 | 34 | 0 | 1 | 107 | 862620 | 862726 | Candidatus Saccharibacteria bacterium oral taxon 488 strain FS15P chromosome, complete genome | blastn | 1120 | 132 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 5426461 | 5426461 | PRJNA1196438_P_NODE_55005_length_265_cov_4.192708_g54578_i0 | PRJNA1196438 | 55005 | 265 | 4.192708 | 11.1106762 | Candidatus Saccharibacteria bacterium oral taxon 488 | 713059 | Bacteria | Bacteria | 322 | 1.67e-83 | NTclustered | gi|1842055115|gb|CP040000.1| | 713059 | g54578 | i0 | 88.636 | 8.84150943396226 | 264 | 30 | 99 | 0 | 2 | 265 | 463877 | 464140 | Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome | blastn | 2343 | 322 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 5426819 | 5426819 | PRJNA1196438_P_NODE_78825_length_236_cov_3.466258_g78398_i0 | PRJNA1196438 | 78825 | 236 | 3.466258 | 8.18036888 | Candidatus Minimicrobia naudis | 2841263 | Bacteria | Bacteria | 409 | 1.09e-109 | NTclustered | gi|2052595119|gb|CP076460.1| | 2841263 | g78398 | i0 | 97.881 | 3.88983050847458 | 236 | 5 | 100 | 0 | 1 | 236 | 693821 | 694056 | Candidatus Minimicrobia naudis isolate IHU1 chromosome, complete genome | blastn | 918 | 409 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Minimicrobia | Candidatus Minimicrobia naudis | |||||
| 6700919 | 6700919 | PRJNA1196438_P_NODE_36446_length_294_cov_3.013575_g36020_i0 | PRJNA1196438 | 36446 | 294 | 3.013575 | 8.8599105 | Candidatus Nanosynbacter sp. TM7-074 | 3158573 | Bacteria | Bacteria | 132 | 3.41e-26 | NTclustered | gi|2781952016|gb|CP158487.1| | 3158573 | g36020 | i0 | 90.816 | 0.850340136054422 | 98 | 9 | 33 | 0 | 181 | 278 | 29024 | 29121 | Candidatus Nanosynbacter sp. TM7-074 chromosome, complete genome | blastn | 250 | 132 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. TM7-074 | ||
| 6701361 | 6701361 | PRJNA1196438_P_NODE_68446_length_248_cov_10.857143_g68019_i0 | PRJNA1196438 | 68446 | 248 | 10.857143 | 26.92571464 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g68019 | i0 | 98.79 | 1 | 248 | 3 | 100 | 0 | 1 | 248 | 121958 | 121711 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 248 | 442 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 7421315 | 7421315 | PRJNA1196438_P_NODE_65386_length_251_cov_3.483146_g64959_i0 | PRJNA1196438 | 65386 | 251 | 3.483146 | 8.74269646 | root | 1 | Root_unresolved | Root_unresolved | 97.1 | 1.04e-15 | NTclustered | gi|1842055981|gb|CP040001.1| | 713059 | g64959 | i0 | 95.082 | 22.593625498008 | 61 | 3 | 24 | 0 | 189 | 249 | 435993 | 435933 | Candidatus Saccharibacteria bacterium oral taxon 488 strain CM006 chromosome, complete genome | blastn | 5671 | 97.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 9251617 | 9251617 | PRJNA1196438_P_NODE_85328_length_215_cov_4.302817_g84900_i0 | PRJNA1196438 | 85328 | 215 | 4.302817 | 9.25105655 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 353 | 4.64e-93 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g84900 | i0 | 96.279 | 1 | 215 | 8 | 100 | 0 | 1 | 215 | 684455 | 684669 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 215 | 353 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 11801454 | 11801454 | PRJNA1196438_P_NODE_24370_length_311_cov_3.369748_g23944_i0 | PRJNA1196438 | 24370 | 311 | 3.369748 | 10.47991628 | Candidatus Saccharibacteria bacterium oral taxon 955 | 2572087 | Bacteria | Bacteria | 272 | 2.0499999999999993e-68 | NTclustered | gi|1842052453|gb|CP040010.1| | 2572087 | g23944 | i0 | 99.333 | 6.29260450160772 | 150 | 1 | 97 | 0 | 1 | 150 | 789026 | 788877 | Candidatus Saccharibacteria bacterium oral taxon 955 strain CM003 chromosome, complete genome | blastn | 1957 | 272 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 955 | ||||||
| 14352349 | 14352349 | PRJNA1196438_P_NODE_58212_length_261_cov_1.319149_g57785_i0 | PRJNA1196438 | 58212 | 261 | 1.319149 | 3.44297889 | Vermiphilus pyriformis | 1763547 | Bacteria | Bacteria | 472 | 1.54e-128 | NTclustered | gi|2207817285|gb|CP074345.1| | 1763547 | g57785 | i0 | 99.234 | 89.9272030651341 | 261 | 2 | 100 | 0 | 1 | 261 | 974743 | 974483 | MAG: Vermiphilus pyriformis isolate TW-EDP1-1 chromosome, complete genome | blastn | 23471 | 472 | 1 | Bacteria | Bacteria candidate phyla | Vermiphilus | Vermiphilus pyriformis | ||||||
| 15625890 | 15625890 | PRJNA1196438_P_NODE_41453_length_286_cov_5.262911_g41026_i0 | PRJNA1196438 | 41453 | 286 | 5.262911 | 15.05192546 | Candidatus Saccharibacteria bacterium oral taxon 488 | 713059 | Bacteria | Bacteria | 435 | 2.25e-117 | NTclustered | gi|1842055115|gb|CP040000.1| | 713059 | g41026 | i0 | 94.077 | 9.02097902097902 | 287 | 15 | 100 | 2 | 1 | 286 | 64477 | 64762 | Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome | blastn | 2580 | 435 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 16900379 | 16900379 | PRJNA1196438_P_NODE_53334_length_268_cov_2.046154_g52907_i0 | PRJNA1196438 | 53334 | 268 | 2.046154 | 5.48369272 | Candidatus Mycosynbacter amalyticus | 2665156 | Bacteria | Bacteria | 161 | 3.909999999999999e-35 | NTclustered | gi|1799615131|gb|CP045921.1| | 2665156 | g52907 | i0 | 77.695 | 1.00373134328358 | 269 | 56 | 99 | 4 | 1 | 267 | 242535 | 242269 | Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome | blastn | 269 | 161 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Mycosynbacter | Candidatus Mycosynbacter amalyticus | |||||
| 17621276 | 17621276 | PRJNA1196438_P_NODE_82234_length_229_cov_2.737179_g81807_i0 | PRJNA1196438 | 82234 | 229 | 2.737179 | 6.26813991 | Candidatus Nanosynbacteraceae | 2093822 | Bacteria | Bacteria | 363 | 8.309999999999999e-96 | NTclustered | gi|734569044|gb|CP007496.1| | 2093824 | g81807 | i0 | 95.197 | 4.02620087336245 | 229 | 11 | 100 | 0 | 1 | 229 | 694549 | 694777 | Candidatus Nanosynbacter lyticus strain TM7x chromosome, complete genome | blastn | 922 | 363 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter lyticus | ||
| 19449306 | 19449306 | PRJNA1196438_P_NODE_54156_length_267_cov_1.597938_g53729_i0 | PRJNA1196438 | 54156 | 267 | 1.597938 | 4.26649446 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 394 | 3.52e-105 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g53729 | i0 | 93.561 | 27.6629213483146 | 264 | 17 | 99 | 0 | 2 | 265 | 285854 | 286117 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 7386 | 394 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 22000229 | 22000229 | PRJNA1196438_P_NODE_68418_length_249_cov_0.886364_g67991_i0 | PRJNA1196438 | 68418 | 249 | 0.886364 | 2.20704636 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 377 | 3.27e-100 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g67991 | i0 | 93.976 | 1 | 249 | 15 | 100 | 0 | 1 | 249 | 803207 | 803455 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 249 | 377 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 23995412 | 23995412 | PRJNA1196438_P_NODE_39359_length_290_cov_1.433180_g38932_i0 | PRJNA1196438 | 39359 | 290 | 1.43318 | 4.156222 | Candidatus Nanosynbacteraceae | 2093822 | Bacteria | Bacteria | 464 | 2.9099999999999993e-126 | NTclustered | gi|2306607015|emb|OX335598.1| | 2026720 | g38932 | i0 | 95.517 | 7.95862068965517 | 290 | 13 | 100 | 0 | 1 | 290 | 568192 | 567903 | Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 | blastn | 2308 | 464 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;