RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1196384" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196384 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
322652 322652 PRJNA1196384_S_NODE_1101_length_366_cov_5.367781_g1037_i0 PRJNA1196384 1101 366 5.367781 19.64607846 Linderina pennispora 61395 Fungi Fungi 350 1.1e-91   NTclustered gi|2028313032|ref|XM_040890055.1| 61395 g1037 i0 91.373 70.4972677595628 255 22 70 0 104 358 270 16 Linderina pennispora L41 ribosomal protein (DL89DRAFT_290178), partial mRNA blastn 25802 350 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
5425815 5425815 PRJNA1196384_S_NODE_1065_length_371_cov_2.577844_g1001_i0 PRJNA1196384 1065 371 2.577844 9.56380124 Linderina pennispora 61395 Fungi Fungi 243 1.95e-59   NTclustered gi|2028323590|ref|XM_040885143.1| 61395 g1001 i0 80.892 38.8625336927224 314 55 84 4 3 312 416 728 Linderina pennispora putative 60s ribosomal protein l7 (DL89DRAFT_248191), partial mRNA blastn 14418 243 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
11801206 11801206 PRJNA1196384_S_NODE_3150_length_219_cov_1.967033_g3086_i0 PRJNA1196384 3150 219 1.967033 4.30780227 Linderina pennispora 61395 Fungi Fungi 130 8.7e-26   NTclustered gi|2028323302|ref|XM_040891225.1| 61395 g3086 i0 83.453 10.2785388127854 139 23 63 0 4 142 348 210 Linderina pennispora WD40 repeat-like protein (DL89DRAFT_32066), mRNA blastn 2251 130 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17620928 17620928 PRJNA1196384_S_NODE_5054_length_181_cov_1.715278_g4990_i0 PRJNA1196384 5054 181 1.715278 3.10465318 Fungi 4751 Fungi Fungi 104 4.18e-18   NTclustered gi|2028314666|ref|XM_040892189.1| 61395 g4990 i0 92.958 2.37016574585635 71 5 39 0 78 148 964 894 Linderina pennispora cell division control protein 42 (DL89DRAFT_86994), mRNA blastn 429 104 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;