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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1196384" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1196384 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1597390 1597390 PRJNA1196384_S_NODE_942_length_395_cov_3.064246_g878_i0 PRJNA1196384 942 395 3.064246 12.1037717 Polychytrium aggregatum 110093 Fungi Fungi 209 2.12e-49   NTclustered gi|2432170888|ref|XM_053112523.1| 110093 g878 i0 78.846 3.37215189873418 312 64 79 2 81 391 677 367 Polychytrium aggregatum putative 40S ribosomal protein S3 (BJ171DRAFT_522887), mRNA blastn 1332 209 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
2873466 2873466 PRJNA1196384_S_NODE_4063_length_197_cov_2.325000_g3999_i0 PRJNA1196384 4063 197 2.325 4.58025 Fimicolochytrium jonesii 1396493 Fungi Fungi 126 9.91e-25   NTclustered gi|2432083867|ref|XM_053064558.1| 1396493 g3999 i0 87.273 10.5177664974619 110 14 56 0 55 164 1077 1186 Fimicolochytrium jonesii mitochondrial carrier protein (EV422DRAFT_106782), mRNA blastn 2072 126 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
2873485 2873485 PRJNA1196384_S_NODE_5183_length_179_cov_4.669014_g5119_i0 PRJNA1196384 5183 179 4.669014 8.35753506 Batrachochytrium dendrobatidis 109871 Fungi Fungi 100 5.34e-17   NTclustered gi|575484485|ref|XM_006681474.1| 684364 g5119 i0 92.754 1.11731843575419 69 5 39 0 105 173 198 130 Batrachochytrium dendrobatidis JAM81 ribosomal 60S subunit protein L39 (BATDEDRAFT_91214), partial mRNA blastn 200 100 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
3593592 3593592 PRJNA1196384_S_NODE_5343_length_177_cov_2.128571_g5279_i0 PRJNA1196384 5343 177 2.128571 3.76757067 Fungi 4751 Fungi Fungi 134 5.190000000000001e-27   NTclustered gi|2432131463|ref|XM_053113103.1| 110093 g5279 i0 91.667 55.683615819209 96 8 54 0 74 169 213 118 Polychytrium aggregatum translation protein SH3-like domain-containing protein (BJ171DRAFT_557634), partial mRNA blastn 9856 134 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6700572 6700572 PRJNA1196384_S_NODE_3726_length_204_cov_3.964072_g3662_i0 PRJNA1196384 3726 204 3.964072 8.08670688 Polychytrium aggregatum 110093 Fungi Fungi 159 1.02e-34   NTclustered gi|2432132805|ref|XM_053109589.1| 110093 g3662 i0 81.188 11.6372549019608 202 34 98 3 1 200 579 380 Polychytrium aggregatum 50S ribosomal protein L30e-like protein (BJ171DRAFT_490208), mRNA blastn 2374 159 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9250562 9250562 PRJNA1196384_S_NODE_2148_length_265_cov_1.622807_g2084_i0 PRJNA1196384 2148 265 1.6228070000000001 4.30043855 Polychytrium aggregatum 110093 Fungi Fungi 113 1.1e-20   NTclustered gi|2432164628|ref|XM_053113621.1| 110093 g2084 i0 81.69 37.2490566037736 142 20 52 3 127 265 1408 1270 Polychytrium aggregatum Adenosylhomocysteinase (BJ171DRAFT_570225), mRNA blastn 9871 113 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9250688 9250688 PRJNA1196384_S_NODE_988_length_385_cov_5.600575_g924_i0 PRJNA1196384 988 385 5.600575 21.56221375 Polychytrium aggregatum 110093 Fungi Fungi 156 2.72e-33   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g924 i0 79.812 40.6077922077922 213 43 55 0 55 267 64 276 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 15634 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18174391 18174391 PRJNA1196384_S_NODE_895_length_406_cov_3.658537_g831_i0 PRJNA1196384 895 406 3.658537 14.85366022 Polychytrium aggregatum 110093 Fungi Fungi 274 7.64e-69   NTclustered gi|2432131875|ref|XM_053109384.1| 110093 g831 i0 83.673 64.8669950738916 294 44 72 4 78 369 416 125 Polychytrium aggregatum 40S ribosomal protein S20 (BJ171DRAFT_488555), mRNA blastn 26336 274 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23274924 23274924 PRJNA1196384_S_NODE_3539_length_209_cov_1.552326_g3475_i0 PRJNA1196384 3539 209 1.552326 3.24436134 Polychytrium aggregatum 110093 Fungi Fungi 135 1.7700000000000002e-27   NTclustered gi|2432150950|ref|XM_053107694.1| 110093 g3475 i0 82.781 2.21052631578947 151 26 72 0 1 151 2683 2533 Polychytrium aggregatum elongation factor EF-3 (BJ171DRAFT_424968), partial mRNA blastn 462 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;