RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1196384" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
322705 322705 PRJNA1196384_S_NODE_4701_length_186_cov_2.073826_g4637_i0 PRJNA1196384 4701 186 2.073826 3.85731636 Porospora cf. gigantea B 2853592 SAR_Eukaryotes SAR_Eukaryotes 161 2.53e-35   NTclustered gi|2806422306|ref|XM_068520460.1| 2853592 g4637 i0 82.796 4.45698924731183 186 26 98 6 2 184 300 118 MAG: Porospora cf. gigantea B uncharacterized protein (KVP17_003324), partial mRNA blastn 829 161 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea B
19448778 19448778 PRJNA1196384_S_NODE_6636_length_163_cov_1.857143_g6572_i0 PRJNA1196384 6636 163 1.857143 3.02714309 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.75e-6   NTclustered gi|921119139|ref|XM_013578735.1| 51315 g6572 i0 95.122 0.251533742331288 41 2 25 0 85 125 474 514 Eimeria necatrix 60S ribosomal protein L10a, putative partial mRNA blastn 41 65.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;