RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1195551" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1195551 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1597245 1597245 PRJNA1195551_S_NODE_8642_length_311_cov_1.587786_g8289_i0 PRJNA1195551 8642 311 1.587786 4.93801446 Strigomonas oncopelti 5657 Euglenozoa other_Eukaryota 174 5.95e-39   NTclustered gi|529496333|gb|KC545072.1| 5657 g8289 i0 77.429 22.4662379421222 319 55 98 11 6 311 1163 849 Strigomonas oncopelti clone CON_3.3.1.1 adenosylhomocysteinase gene, partial cds blastn 6987 174 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas oncopelti
15070753 15070753 PRJNA1195551_S_NODE_10752_length_287_cov_4.693277_g10399_i0 PRJNA1195551 10752 287 4.693277 13.46970499 Petalomonas 56451 Euglenozoa other_Eukaryota 379 1.07e-100   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g10399 i0 90.941 72.8675958188153 287 19 100 4 1 287 1604 1883 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 20913 379 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
19448556 19448556 PRJNA1195551_S_NODE_10316_length_292_cov_1.588477_g9963_i0 PRJNA1195551 10316 292 1.588477 4.63835284 Petalomonas plana 2704094 Euglenozoa other_Eukaryota 231 3.24e-56   NTclustered gi|1803019517|gb|MT007903.1| 2704094 g9963 i0 89.305 56.8527397260274 187 16 64 4 106 292 282 464 Petalomonas plana isolate UB22 small subunit ribosomal RNA gene, partial sequence blastn 16601 231 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas plana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;