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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA1195374 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2317928 2317928 PRJNA1195374_P_NODE_24102_length_462_cov_3.367609_g23758_i0 PRJNA1195374 24102 462 3.367609 15.55835358 Cochliopodium 313557 Discosea other_Eukaryota 848 0   NTclustered gi|399764160|gb|JQ271671.1| 313997 g23758 i0 99.784 64.1818181818182 462 1 100 0 1 462 27 488 Cochliopodium minus strain 4692S 18S ribosomal RNA gene, partial sequence blastn 29652 848 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
2318195 2318195 PRJNA1195374_P_NODE_55182_length_292_cov_3.968037_g54838_i0 PRJNA1195374 55182 292 3.968037 11.58666804 Vannella 95228 Discosea other_Eukaryota 448 2.9499999999999995e-121   NTclustered gi|284192604|gb|GQ265402.1| 197532 g54838 i0 94.521 96.1027397260274 292 12 100 2 1 292 514 801 Vannella simplex strain Ladoga Cl 12/2 clone A144.5 18S ribosomal RNA gene, partial sequence blastn 28062 448 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
2872826 2872826 PRJNA1195374_P_NODE_62743_length_272_cov_1.809045_g62399_i0 PRJNA1195374 62743 272 1.809045 4.9206024 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 148 3.0899999999999993e-31   NTclustered gi|470374499|ref|XM_004333054.1| 1257118 g62399 i0 80.513 1.59191176470588 195 36 71 2 20 213 166 359 Acanthamoeba castellanii str. Neff ribosomal protein L32, putative (ACA1_334790), partial mRNA blastn 433 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4149250 4149250 PRJNA1195374_P_NODE_784_length_1692_cov_3.061767_g686_i0 PRJNA1195374 784 1692 3.061767 51.80509764 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 510 2.39e-139   NTclustered gi|470416742|ref|XM_004336868.1| 1257118 g686 i0 76.072 34.2039007092199 1049 211 61 27 310 1341 801 1826 Acanthamoeba castellanii str. Neff ribonuclease L inhibitor family protein (ACA1_325180), partial mRNA blastn 57873 510 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4871062 4871062 PRJNA1195374_P_NODE_8144_length_764_cov_9.649783_g7836_i0 PRJNA1195374 8144 764 9.649783 73.72434212 Vannella 95228 Discosea other_Eukaryota 1212 0   NTclustered gi|861554667|gb|KP719197.1| 197532 g7836 i0 95.269 83.934554973822 761 35 99 1 5 764 1381 621 Vannella simplex strain A17WVB small subunit ribosomal RNA gene, partial sequence blastn 64126 1221 0.992628992628993 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
5424226 5424226 PRJNA1195374_P_NODE_15045_length_582_cov_3.261297_g14705_i0 PRJNA1195374 15045 582 3.261297 18.98074854 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 300 1.86e-76   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g14705 i0 78.867 14.7319587628866 459 86 78 7 128 582 2520 2069 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 8574 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6698985 6698985 PRJNA1195374_P_NODE_17626_length_539_cov_8.394850_g17284_i0 PRJNA1195374 17626 539 8.39485 45.2482415 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.36e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g17284 i0 80.795 55.9146567717996 302 58 56 0 103 404 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6699342 6699342 PRJNA1195374_P_NODE_35766_length_376_cov_1.415842_g35422_i0 PRJNA1195374 35766 376 1.415842 5.32356592 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.036   NTclustered gi|470467159|ref|XM_004341730.1| 1257118 g35422 i0 90 0.106382978723404 40 4 11 0 166 205 1371 1332 Acanthamoeba castellanii str. Neff RFX DNAbinding domain containing protein (ACA1_199700), partial mRNA blastn 40 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7974292 7974292 PRJNA1195374_P_NODE_10267_length_691_cov_7.739482_g9950_i0 PRJNA1195374 10267 691 7.739482 53.47982062 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.3e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g9950 i0 79.235 67.1157742402315 549 104 79 8 129 672 544 1 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46377 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9249510 9249510 PRJNA1195374_P_NODE_42008_length_343_cov_2.229630_g41664_i0 PRJNA1195374 42008 343 2.22963 7.6476309 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 2.42e-28   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g41664 i0 86.508 0.530612244897959 126 17 37 0 171 296 944 819 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 182 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10526203 10526203 PRJNA1195374_P_NODE_85469_length_240_cov_4.784431_g85125_i0 PRJNA1195374 85469 240 4.784431 11.4826344 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 422 1.4299999999999998e-113   NTclustered gi|62865938|gb|AY929913.1| 325084 g85125 i0 98.333 85.8083333333333 240 4 100 0 1 240 11 250 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 20594 422 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
11245874 11245874 PRJNA1195374_P_NODE_23789_length_465_cov_2.150510_g23445_i0 PRJNA1195374 23789 465 2.15051 9.9998715 Cochliopodium 313557 Discosea other_Eukaryota 859 0   NTclustered gi|659103902|gb|KJ569713.1| 313997 g23445 i0 100 63.9935483870968 465 0 100 0 1 465 1379 1843 Cochliopodium minus clone 1101 18S ribosomal RNA gene, partial sequence blastn 29757 859 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
11799817 11799817 PRJNA1195374_P_NODE_24410_length_459_cov_5.028497_g24066_i0 PRJNA1195374 24410 459 5.028497 23.08080123 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 156 3.2999999999999996e-33   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g24066 i0 87.407 8.11328976034858 135 17 29 0 48 182 148 282 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 3724 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11799959 11799959 PRJNA1195374_P_NODE_31430_length_403_cov_1.439394_g31086_i0 PRJNA1195374 31430 403 1.439394 5.80075782 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 185 3.65e-42   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g31086 i0 81.197 20.1017369727047 234 41 58 2 170 403 2499 2269 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 8101 185 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11800088 11800088 PRJNA1195374_P_NODE_38410_length_361_cov_2.527778_g38066_i0 PRJNA1195374 38410 361 2.527778 9.12527858 Vannella sp. 1973054 Discosea other_Eukaryota 662 0   NTclustered gi|1858337158|gb|MT621571.1| 1973054 g38066 i0 99.723 96.6426592797784 361 1 100 0 1 361 175 535 Vannella sp. isolate VWR2 small subunit ribosomal RNA gene, partial sequence blastn 34888 662 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
14351289 14351289 PRJNA1195374_P_NODE_75752_length_248_cov_0.880000_g75408_i0 PRJNA1195374 75752 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 128 3.62e-25   NTclustered gi|470379472|ref|XM_004333539.1| 1257118 g75408 i0 78.182 2.70564516129032 220 35 88 8 31 248 856 648 Acanthamoeba castellanii str. Neff KH domain containing protein (ACA1_258250), partial mRNA blastn 671 128 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15624180 15624180 PRJNA1195374_P_NODE_32313_length_397_cov_1.700617_g31969_i0 PRJNA1195374 32313 397 1.700617 6.75144949 Platyamoeba placida 3454475 Discosea other_Eukaryota 499 1.1299999999999999e-136   NTclustered gi|33946348|gb|AY294153.1| 197527 g31969 i0 89.394 101.07556675063 396 42 99 0 1 396 477 872 Platyamoeba placida actin mRNA, partial cds blastn 40127 499 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
16898670 16898670 PRJNA1195374_P_NODE_39894_length_354_cov_0.896797_g39550_i0 PRJNA1195374 39894 354 0.896797 3.17466138 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 161 5.33e-35   NTclustered gi|470525918|ref|XM_004356620.1| 1257118 g39550 i0 84.94 0.468926553672316 166 18 46 6 101 263 1167 1006 Acanthamoeba castellanii str. Neff actinrelated protein 2 isoform 4, putative (ACA1_174340), partial mRNA blastn 166 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18173228 18173228 PRJNA1195374_P_NODE_41155_length_347_cov_1.773723_g40811_i0 PRJNA1195374 41155 347 1.773723 6.15481881 Vannella miroides 218656 Discosea other_Eukaryota 597 3.369999999999999e-166   NTclustered gi|27803574|gb|AY183888.1| 218656 g40811 i0 97.695 96.8530259365994 347 8 100 0 1 347 1929 1583 Vannella miroides small subunit ribosomal RNA gene, complete sequence blastn 33608 597 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella miroides
19447055 19447055 PRJNA1195374_P_NODE_13956_length_602_cov_4.869565_g13618_i0 PRJNA1195374 13956 602 4.869565 29.3147813 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 278 9.03e-70   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g13618 i0 84.507 20.6212624584718 284 40 47 4 215 496 302 21 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 12414 278 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21444416 21444416 PRJNA1195374_P_NODE_10937_length_672_cov_3.392321_g10613_i0 PRJNA1195374 10937 672 3.392321 22.79639712 Cochliopodium 313557 Discosea other_Eukaryota 1229 0   NTclustered gi|659103902|gb|KJ569713.1| 313997 g10613 i0 99.702 54.8303571428571 671 2 99 0 1 671 611 1281 Cochliopodium minus clone 1101 18S ribosomal RNA gene, partial sequence blastn 36846 1229 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
23274032 23274032 PRJNA1195374_P_NODE_53279_length_299_cov_1.247788_g52935_i0 PRJNA1195374 53279 299 1.247788 3.73088612 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.028   NTclustered gi|470446945|ref|XM_004339965.1| 1257118 g52935 i0 96.875 0.107023411371237 32 0 11 1 120 151 1419 1389 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_209380), partial mRNA blastn 32 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;