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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1195374 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5425299 5425299 PRJNA1195374_P_NODE_68805_length_256_cov_1.371585_g68461_i0 PRJNA1195374 68805 256 1.371585 3.5112576 Fimicolochytrium jonesii 1396493 Fungi Fungi 213 1.01e-50   NTclustered gi|2432080199|ref|XM_053074428.1| 1396493 g68461 i0 82.845 9.24609375 239 39 93 2 19 256 1415 1178 Fimicolochytrium jonesii uncharacterized protein (EV422DRAFT_81595), mRNA blastn 2367 213 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
6698842 6698842 PRJNA1195374_P_NODE_10626_length_681_cov_4.805921_g10305_i0 PRJNA1195374 10626 681 4.805921 32.72832201 Polychytrium aggregatum 110093 Fungi Fungi 200 2.29e-46   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g10305 i0 76.485 20.4449339207048 404 73 58 16 214 609 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14351063 14351063 PRJNA1195374_P_NODE_63432_length_271_cov_0.909091_g63088_i0 PRJNA1195374 63432 271 0.909091 2.46363661 Neocallimastix frontalis 4757 Fungi Fungi 193 1.3999999999999998e-44   NTclustered gi|387233098|gb|JN033859.1| 4757 g63088 i0 80.377 16.6088560885609 265 42 96 9 1 260 277 536 Neocallimastix frontalis strain PMA02 isocitrate dehydrogenase (IDH2) mRNA, partial cds blastn 4501 193 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix frontalis
15624904 15624904 PRJNA1195374_P_NODE_68033_length_258_cov_1.664865_g67689_i0 PRJNA1195374 68033 258 1.664865 4.2953517 Polychytrium aggregatum 110093 Fungi Fungi 121 6.35e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g67689 i0 84.252 8.32170542635659 127 16 48 3 126 250 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20168904 20168904 PRJNA1195374_P_NODE_31676_length_401_cov_3.384146_g31332_i0 PRJNA1195374 31676 401 3.384146 13.57042546 Fungi 4751 Fungi Fungi 150 1.3199999999999999e-31   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g31332 i0 81.967 34.5211970074813 183 27 46 4 190 372 523 347 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13843 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23273454 23273454 PRJNA1195374_P_NODE_24619_length_457_cov_3.718750_g24275_i0 PRJNA1195374 24619 457 3.71875 16.9946875 Polychytrium aggregatum 110093 Fungi Fungi 148 5.5e-31   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g24275 i0 80 21.4245076586433 205 37 44 4 192 394 276 74 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 9791 148 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;