RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA1195374 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13796079 13796079 PRJNA1195374_P_NODE_44431_length_333_cov_1.126923_g44087_i0 PRJNA1195374 44431 333 1.126923 3.75265359 Parvoviridae 10780 Viruses Viruses 599 8.94e-167   NTclustered gi|2441950215|gb|OM892330.1| 2030127 g44087 i0 99.099 36.1951951951952 333 3 100 0 1 333 4068 4400 MAG: Densovirinae sp. isolate 155Un-Den, complete genome blastn 12053 599 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum5
16898377 16898377 PRJNA1195374_P_NODE_254_length_2381_cov_5.298527_g200_i0 PRJNA1195374 254 2381 5.298527 126.15792787 Zophobas morio black wasting virus 3067671 Viruses Viruses 2819 0   NTclustered gi|2558991804|gb|OR026174.1| 3067671 g200 i0 98.983 35.1532969340613 1574 16 100 0 808 2381 4203 2630 Zophobas morio black wasting virus strain Indiana-morio, complete genome blastn 83700 2819 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Zophobas morio black wasting virus
19448553 19448553 PRJNA1195374_P_NODE_996_length_1588_cov_5.542574_g886_i0 PRJNA1195374 996 1588 5.542574 88.01607512 Zophobas morio black wasting virus 3067671 Viruses Viruses 2841 0   NTclustered gi|2558991856|gb|OR026180.1| 3067671 g886 i0 99.551 80.9389168765743 1559 7 98 0 1 1559 2554 996 Zophobas morio black wasting virus strain New York 1-morio, complete genome blastn 128531 2841 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Zophobas morio black wasting virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;