RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1195374 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5425455 5425455 PRJNA1195374_P_NODE_7625_length_785_cov_2.651685_g7320_i0 PRJNA1195374 7625 785 2.651685 20.81572725 Haloprofundus sp. MHR1 2572921 Archaea Archaea 54.7 0.022   NTclustered gi|1633225932|gb|CP039833.1| 2572921 g7320 i0 100 0.0369426751592357 29 0 4 0 332 360 732318 732346 Haloprofundus sp. MHR1 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus sp. MHR1
14351072 14351072 PRJNA1195374_P_NODE_64012_length_269_cov_1.275510_g63668_i0 PRJNA1195374 64012 269 1.27551 3.4311219 Salinarchaeum sp. IM2453 2862870 Archaea Archaea 52.8 0.025   NTclustered gi|2082835402|gb|CP081183.1| 2862870 g63668 i0 100 0.104089219330855 28 0 10 0 25 52 865025 864998 Salinarchaeum sp. IM2453 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Salinarchaeum Salinarchaeum sp. IM2453
15624669 15624669 PRJNA1195374_P_NODE_55813_length_290_cov_2.829493_g55469_i0 PRJNA1195374 55813 290 2.829493 8.2055297 Halarchaeum sp. CBA1220 1853682 Archaea Archaea 52.8 0.027   NTclustered gi|1864271124|gb|CP054708.1| 1853682 g55469 i0 100 0.096551724137931 28 0 10 0 8 35 164265 164292 Halarchaeum sp. CBA1220 plasmid pCBA1220-01, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp. CBA1220
18174012 18174012 PRJNA1195374_P_NODE_80715_length_244_cov_0.900585_g80371_i0 PRJNA1195374 80715 244 0.900585 2.1974274 Halobacterium wangiae 2902623 Archaea Archaea 52.8 0.022   NTclustered gi|2168769890|gb|CP089588.1| 2902623 g80371 i0 100 0.114754098360656 28 0 11 0 131 158 1095669 1095642 Halobacterium wangiae strain Gai3-17 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium wangiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;