RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14350990 14350990 PRJNA1195374_P_NODE_59772_length_280_cov_1.734300_g59428_i0 PRJNA1195374 59772 280 1.7343 4.85604 Paramecium bursaria Chlorella virus NE-JV-1 1278261 Viruses Viruses 97.1 1.18e-15   NTclustered gi|448932590|gb|JX997176.1| 1278261 g59428 i0 98.182 1.28214285714286 55 1 20 0 226 280 218820 218766 Paramecium bursaria Chlorella virus NE-JV-1, partial genome blastn 359 97.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Paramecium bursaria Chlorella virus NE-JV-1
24548072 24548072 PRJNA1195374_P_NODE_58640_length_283_cov_1.466667_g58296_i0 PRJNA1195374 58640 283 1.466667 4.15066761 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 185 2.4699999999999998e-42   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g58296 i0 80.913 0.851590106007067 241 41 84 5 2 240 964653 964890 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 241 185 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;