RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1195374" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA1195374 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
321487 321487 PRJNA1195374_P_NODE_35081_length_380_cov_1.475570_g34737_i0 PRJNA1195374 35081 380 1.47557 5.607166 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.036   NTclustered gi|2794959522|ref|XM_067873995.1| 2049356 g34737 i0 100 0.0736842105263158 28 0 7 0 44 71 9060 9033 Monocercomonoides exilis uncharacterized protein (MONOS_3961), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
9250111 9250111 PRJNA1195374_P_NODE_73028_length_250_cov_0.870056_g72684_i0 PRJNA1195374 73028 250 0.870056 2.17514 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 60.2 1.35e-4   NTclustered gi|2794889849|ref|XM_067922471.1| 135588 g72684 i0 100 0.128 32 0 13 0 132 163 2347 2378 Histomonas meleagridis uncharacterized protein (GO595_008851), partial mRNA blastn 32 60.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
10525242 10525242 PRJNA1195374_P_NODE_37169_length_368_cov_1.461017_g36825_i0 PRJNA1195374 37169 368 1.461017 5.37654256 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 117 1.22e-21   NTclustered gi|2319583589|ref|XM_001579516.2| 412133 g36825 i0 79.006 14.6766304347826 181 31 48 6 192 368 365 188 Trichomonas vaginalis G3 histone H2A (TVAGG3_1012540), partial mRNA blastn 5401 117 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
18173468 18173468 PRJNA1195374_P_NODE_53475_length_298_cov_1.711111_g53131_i0 PRJNA1195374 53475 298 1.711111 5.09911078 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 4.6e-5   NTclustered gi|2794976600|ref|XM_067873006.1| 2049356 g53131 i0 97.222 0.228187919463087 36 1 12 0 164 199 1704 1669 Monocercomonoides exilis putative Casein kinase I (MONOS_3036), mRNA blastn 68 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
21997787 21997787 PRJNA1195374_P_NODE_14538_length_591_cov_2.254826_g14199_i0 PRJNA1195374 14538 591 2.254826 13.32602166 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 331 6.7e-86   NTclustered gi|339759377|dbj|AB600301.1| 926446 g14199 i0 80.543 71.3011844331641 442 77 74 8 4 440 842 1279 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 42139 331 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;