contig_metadata
73 rows where analysis = "blastn", bioproject = "PRJNA1192965" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320567 | 320567 | PRJNA1192965_P_NODE_3181_length_253_cov_1.711111_g3162_i0 | PRJNA1192965 | 3181 | 253 | 1.711111 | 4.32911083 | Pseudomonas lundensis | 86185 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1918119285|gb|CP017687.2| | 86185 | g3162 | i0 | 86.538 | 2.11857707509881 | 52 | 4 | 20 | 3 | 120 | 170 | 3287991 | 3287942 | Pseudomonas lundensis strain AU1044 chromosome, complete genome | blastn | 536 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas lundensis | ||
| 1042367 | 1042367 | PRJNA1192965_P_NODE_2501_length_278_cov_1.502439_g2482_i0 | PRJNA1192965 | 2501 | 278 | 1.502439 | 4.17678042 | Pseudomonas | 286 | Bacteria | Bacteria | 475 | 1.2799999999999997e-129 | NTclustered | gi|2701809830|emb|OZ024668.1| | 294 | g2482 | i0 | 97.482 | 99.9388489208633 | 278 | 7 | 100 | 0 | 1 | 278 | 193878 | 194155 | Pseudomonas fluorescens isolate PS652 genome assembly, chromosome: 1 | blastn | 27783 | 475 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 1042371 | 1042371 | PRJNA1192965_P_NODE_4221_length_246_cov_0.890173_g4202_i0 | PRJNA1192965 | 4221 | 246 | 0.890173 | 2.18982558 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4202 | i0 | 100 | 548.170731707317 | 246 | 0 | 100 | 0 | 1 | 246 | 3936213 | 3935968 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 134850 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1595159 | 1595159 | PRJNA1192965_P_NODE_2822_length_265_cov_1.604167_g2803_i0 | PRJNA1192965 | 2822 | 265 | 1.604167 | 4.25104255 | Comamonadaceae bacterium OTU4NAUVB1 | 2952996 | Bacteria | Bacteria | 224 | 4.8499999999999997e-54 | NTclustered | gi|2274984632|gb|CP099605.1| | 2952996 | g2803 | i0 | 81.955 | 4.53207547169811 | 266 | 46 | 100 | 2 | 1 | 265 | 956694 | 956430 | Comamonadaceae bacterium OTU4NAUVB1 chromosome, complete genome | blastn | 1201 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonadaceae bacterium OTU4NAUVB1 | |||
| 2317740 | 2317740 | PRJNA1192965_P_NODE_382_length_579_cov_2.705534_g364_i0 | PRJNA1192965 | 382 | 579 | 2.705534 | 15.66504186 | Undibacterium | 401469 | Bacteria | Bacteria | 942 | 0 | NTclustered | gi|1798099803|dbj|AP018441.1| | 2058625 | g364 | i0 | 96.194 | 468.447322970639 | 578 | 18 | 99 | 4 | 1 | 576 | 1530312 | 1530887 | Undibacterium sp. YM2 DNA, complete genome | blastn | 271231 | 942 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. YM2 | ||
| 2317742 | 2317742 | PRJNA1192965_P_NODE_4382_length_245_cov_0.895349_g4363_i0 | PRJNA1192965 | 4382 | 245 | 0.895349 | 2.19360505 | Pseudomonas | 286 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2703320555|gb|CP148126.1| | 303 | g4363 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2831784 | 2831540 | Mutant Pseudomonas putida isolate FELIX_MS547, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 2871293 | 2871293 | PRJNA1192965_P_NODE_4623_length_244_cov_0.900585_g4604_i0 | PRJNA1192965 | 4623 | 244 | 0.900585 | 2.1974274 | Methylophilus methylotrophus | 17 | Bacteria | Bacteria | 435 | 1.87e-117 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g4604 | i0 | 98.77 | 2 | 244 | 3 | 100 | 0 | 1 | 244 | 1650349 | 1650592 | Methylophilus methylotrophus strain D22 chromosome | blastn | 488 | 435 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 2871298 | 2871298 | PRJNA1192965_P_NODE_5163_length_241_cov_0.916667_g5144_i0 | PRJNA1192965 | 5163 | 241 | 0.916667 | 2.20916747 | Bosea sp. Tri-49 | 1867715 | Bacteria | Bacteria | 357 | 4.1099999999999997e-94 | NTclustered | gi|1537898444|gb|CP017946.1| | 1867715 | g5144 | i0 | 93.361 | 89.1452282157676 | 241 | 16 | 100 | 0 | 1 | 241 | 4456929 | 4457169 | Bosea sp. Tri-49, complete sequence | blastn | 21484 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bosea sp. Tri-49 | ||
| 3592850 | 3592850 | PRJNA1192965_P_NODE_3103_length_256_cov_1.393443_g3084_i0 | PRJNA1192965 | 3103 | 256 | 1.393443 | 3.56721408 | Sphingomonas | 13687 | Bacteria | Bacteria | 468 | 1.95e-127 | NTclustered | gi|1846256292|gb|MT527603.1| | 28214 | g3084 | i0 | 99.609 | 105.86328125 | 256 | 1 | 100 | 0 | 1 | 256 | 4 | 259 | Sphingomonas sp. strain SYSU_D00575 16S ribosomal RNA gene, partial sequence | blastn | 27101 | 468 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 3592851 | 3592851 | PRJNA1192965_P_NODE_3503_length_250_cov_0.870056_g3484_i0 | PRJNA1192965 | 3503 | 250 | 0.870056 | 2.17514 | root | 1 | Root_unresolved | Root_unresolved | 462 | 8.83e-126 | NTclustered | gi|184189264|gb|EU640742.1| | 86473 | g3484 | i0 | 100 | 100.204 | 250 | 0 | 100 | 0 | 1 | 250 | 479 | 728 | Uncultured gamma proteobacterium clone GC1m-2-64 16S ribosomal RNA gene, partial sequence | blastn | 25051 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | uncultured Gammaproteobacteria bacterium | |||||
| 3592854 | 3592854 | PRJNA1192965_P_NODE_4343_length_245_cov_0.895349_g4324_i0 | PRJNA1192965 | 4343 | 245 | 0.895349 | 2.19360505 | Enterobacter | 547 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2514466987|gb|CP109738.1| | 158836 | g4324 | i0 | 100 | 99.6897959183674 | 245 | 0 | 100 | 0 | 1 | 245 | 3965282 | 3965038 | Enterobacter hormaechei strain 2017-45-33 chromosome, complete genome | blastn | 24424 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 4147425 | 4147425 | PRJNA1192965_P_NODE_3724_length_249_cov_0.875000_g3705_i0 | PRJNA1192965 | 3724 | 249 | 0.875 | 2.17875 | Pseudomonas sp. LS44 | 1357074 | Bacteria | Bacteria | 60.2 | 1.35e-4 | NTclustered | gi|2288316869|gb|CP102830.1| | 1357074 | g3705 | i0 | 100 | 0.1285140562249 | 32 | 0 | 13 | 0 | 216 | 247 | 4122527 | 4122558 | Pseudomonas sp. LS44 chromosome, complete genome | blastn | 32 | 60.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. LS44 | ||
| 4147426 | 4147426 | PRJNA1192965_P_NODE_4284_length_246_cov_0.890173_g4265_i0 | PRJNA1192965 | 4284 | 246 | 0.890173 | 2.18982558 | Sphingomonas paucimobilis | 13689 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|1943313950|gb|CP065713.1| | 13689 | g4265 | i0 | 99.593 | 5.5650406504065 | 246 | 1 | 100 | 0 | 1 | 246 | 2824047 | 2824292 | Sphingomonas paucimobilis strain FDAARGOS_881 chromosome, complete genome | blastn | 1369 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas paucimobilis | ||
| 6145215 | 6145215 | PRJNA1192965_P_NODE_105_length_982_cov_1993.676568_g93_i0 | PRJNA1192965 | 105 | 982 | 1993.676568 | 19577.90389776 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 1197 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g93 | i0 | 99.846 | 74.4643584521385 | 651 | 1 | 74 | 0 | 96 | 746 | 3406207 | 3405557 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 73124 | 1197 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6145217 | 6145217 | PRJNA1192965_P_NODE_2545_length_276_cov_1.605911_g2526_i0 | PRJNA1192965 | 2545 | 276 | 1.605911 | 4.43231436 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 510 | 3.48e-140 | NTclustered | gi|2894341529|gb|CP178309.1| | 562 | g2526 | i0 | 100 | 777.5 | 276 | 0 | 100 | 0 | 1 | 276 | 3902192 | 3902467 | Escherichia coli strain ECDA0223 chromosome, complete genome | blastn | 214590 | 510 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6698379 | 6698379 | PRJNA1192965_P_NODE_4926_length_242_cov_0.911243_g4907_i0 | PRJNA1192965 | 4926 | 242 | 0.911243 | 2.20520806 | Pseudomonas sp. FJ2-5-13 | 2976884 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2457353195|gb|CP104045.1| | 2976884 | g4907 | i0 | 100 | 100.355371900826 | 242 | 0 | 100 | 0 | 1 | 242 | 5304881 | 5305122 | Pseudomonas sp. FJ2-5-13 chromosome, complete genome | blastn | 24286 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. FJ2-5-13 | ||
| 7420286 | 7420286 | PRJNA1192965_P_NODE_5106_length_241_cov_0.916667_g5087_i0 | PRJNA1192965 | 5106 | 241 | 0.916667 | 2.20916747 | Escherichia | 561 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g5087 | i0 | 100 | 100 | 241 | 0 | 100 | 0 | 1 | 241 | 992309 | 992069 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24100 | 446 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7973781 | 7973781 | PRJNA1192965_P_NODE_3647_length_249_cov_0.875000_g3628_i0 | PRJNA1192965 | 3647 | 249 | 0.875 | 2.17875 | Bradyrhizobium guangzhouense | 1325095 | Bacteria | Bacteria | 346 | 9.229999999999999e-91 | NTclustered | gi|1562497345|gb|CP030053.1| | 1325095 | g3628 | i0 | 92.245 | 125.028112449799 | 245 | 18 | 98 | 1 | 1 | 245 | 5319608 | 5319851 | Bradyrhizobium guangzhouense strain CCBAU 51670 chromosome, complete genome | blastn | 31132 | 346 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium guangzhouense | ||
| 7973794 | 7973794 | PRJNA1192965_P_NODE_4787_length_243_cov_0.905882_g4768_i0 | PRJNA1192965 | 4787 | 243 | 0.905882 | 2.20129326 | Acinetobacter sp. NyZ410 | 2929509 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2218583909|gb|CP094620.1| | 2929509 | g4768 | i0 | 100 | 8 | 243 | 0 | 100 | 0 | 1 | 243 | 601546 | 601788 | Acinetobacter sp. NyZ410 chromosome, complete genome | blastn | 1944 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. NyZ410 | ||
| 8695392 | 8695392 | PRJNA1192965_P_NODE_3087_length_256_cov_3.038251_g3068_i0 | PRJNA1192965 | 3087 | 256 | 3.038251 | 7.77792256 | Escherichia | 561 | Bacteria | Bacteria | 473 | 4.189999999999999e-129 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3068 | i0 | 100 | 100 | 256 | 0 | 100 | 0 | 1 | 256 | 3884612 | 3884867 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 25600 | 473 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 9970513 | 9970513 | PRJNA1192965_P_NODE_1248_length_359_cov_1.076923_g1229_i0 | PRJNA1192965 | 1248 | 359 | 1.076923 | 3.86615357 | Bacteria | 2 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|2558037220|gb|CP130942.1| | 287 | g1229 | i0 | 100 | 103 | 359 | 0 | 100 | 0 | 1 | 359 | 125077 | 124719 | Pseudomonas aeruginosa strain 2023CK-00048 chromosome, complete genome | blastn | 36977 | 664 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 9970518 | 9970518 | PRJNA1192965_P_NODE_3628_length_249_cov_1.477273_g3609_i0 | PRJNA1192965 | 3628 | 249 | 1.477273 | 3.67840977 | Asticcacaulis | 76890 | Bacteria | Bacteria | 449 | 6.840000000000001e-122 | NTclustered | gi|1435235387|dbj|AP018827.1| | 78587 | g3609 | i0 | 99.2 | 166.606425702811 | 250 | 1 | 100 | 1 | 1 | 249 | 1588098 | 1588347 | Asticcacaulis excentricus M6 DNA, chromosome 1, complete geonome | blastn | 41485 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Asticcacaulis | Asticcacaulis excentricus | ||
| 11245686 | 11245686 | PRJNA1192965_P_NODE_1109_length_374_cov_2.196013_g1090_i0 | PRJNA1192965 | 1109 | 374 | 2.196013 | 8.21308862 | Comamonadaceae | 80864 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|2622025017|gb|CP138515.1| | 34073 | g1090 | i0 | 98.663 | 343.005347593583 | 374 | 5 | 100 | 0 | 1 | 374 | 5056807 | 5057180 | Variovorax paradoxus strain 2u118 chromosome, complete genome | blastn | 128284 | 669 | 0.992526158445441 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 11245692 | 11245692 | PRJNA1192965_P_NODE_4149_length_246_cov_0.890173_g4130_i0 | PRJNA1192965 | 4149 | 246 | 0.890173 | 2.18982558 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4130 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 4664378 | 4664133 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11245693 | 11245693 | PRJNA1192965_P_NODE_4869_length_242_cov_1.420118_g4850_i0 | PRJNA1192965 | 4869 | 242 | 1.420118 | 3.43668556 | Escherichia | 561 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4850 | i0 | 99.587 | 100 | 242 | 1 | 100 | 0 | 1 | 242 | 4740137 | 4740378 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24200 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11799072 | 11799072 | PRJNA1192965_P_NODE_1890_length_307_cov_1.089744_g1871_i0 | PRJNA1192965 | 1890 | 307 | 1.089744 | 3.34551408 | uncultured beta proteobacterium | 86027 | Bacteria | Bacteria | 272 | 2.02e-68 | NTclustered | gi|374849904|dbj|AP011643.1| | 86027 | g1871 | i0 | 82.958 | 220.755700325733 | 311 | 43 | 100 | 10 | 1 | 307 | 8907 | 8603 | Uncultured beta proteobacterium DNA, fosmid clone: JFF003_G12 | blastn | 67772 | 272 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | uncultured beta proteobacterium | |||||
| 11799082 | 11799082 | PRJNA1192965_P_NODE_3570_length_250_cov_0.870056_g3551_i0 | PRJNA1192965 | 3570 | 250 | 0.870056 | 2.17514 | Brevundimonas diminuta | 293 | Bacteria | Bacteria | 435 | 1.92e-117 | NTclustered | gi|2636576969|gb|CP140006.1| | 293 | g3551 | i0 | 98 | 87.56 | 250 | 5 | 100 | 0 | 1 | 250 | 1436329 | 1436578 | Brevundimonas diminuta strain HAMBI_0018 chromosome, complete genome | blastn | 21890 | 435 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas diminuta | ||
| 11799087 | 11799087 | PRJNA1192965_P_NODE_4270_length_246_cov_0.890173_g4251_i0 | PRJNA1192965 | 4270 | 246 | 0.890173 | 2.18982558 | Sphingomonas sp. MMS24-J45 | 3238806 | Bacteria | Bacteria | 278 | 3.37e-70 | NTclustered | gi|2851418772|gb|CP173255.1| | 3238806 | g4251 | i0 | 87.045 | 76.1666666666667 | 247 | 30 | 100 | 2 | 1 | 246 | 2246482 | 2246727 | Sphingomonas sp. MMS24-J45 chromosome, complete genome | blastn | 18737 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. MMS24-J45 | ||
| 11799093 | 11799093 | PRJNA1192965_P_NODE_4990_length_242_cov_0.911243_g4971_i0 | PRJNA1192965 | 4990 | 242 | 0.911243 | 2.20520806 | Ochrobactrum quorumnocens | 271865 | Bacteria | Bacteria | 364 | 2.4699999999999992e-96 | NTclustered | gi|1238341835|gb|CP022603.1| | 271865 | g4971 | i0 | 93.802 | 1 | 242 | 15 | 100 | 0 | 1 | 242 | 780463 | 780704 | Ochrobactrum quorumnocens strain A44 chromosome 2, complete sequence | blastn | 242 | 364 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Ochrobactrum | Ochrobactrum quorumnocens | ||
| 11799096 | 11799096 | PRJNA1192965_P_NODE_5350_length_218_cov_6.882759_g5331_i0 | PRJNA1192965 | 5350 | 218 | 6.882759 | 15.00441462 | Undibacterium cyanobacteriorum | 3073561 | Bacteria | Bacteria | 381 | 2.1599999999999994e-101 | NTclustered | gi|2575695762|gb|CP133720.1| | 3073561 | g5331 | i0 | 98.165 | 422.146788990826 | 218 | 4 | 100 | 0 | 1 | 218 | 740292 | 740509 | Undibacterium cyanobacteriorum strain 20NA77.5 chromosome, complete genome | blastn | 92028 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium cyanobacteriorum | ||
| 12521071 | 12521071 | PRJNA1192965_P_NODE_1930_length_305_cov_1.112069_g1911_i0 | PRJNA1192965 | 1930 | 305 | 1.112069 | 3.39181045 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 564 | 2.95e-156 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1911 | i0 | 100 | 100 | 305 | 0 | 100 | 0 | 1 | 305 | 985015 | 984711 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 30500 | 564 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12521077 | 12521077 | PRJNA1192965_P_NODE_4810_length_243_cov_0.905882_g4791_i0 | PRJNA1192965 | 4810 | 243 | 0.905882 | 2.20129326 | Pseudomonas | 286 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2703320555|gb|CP148126.1| | 303 | g4791 | i0 | 100 | 99.7119341563786 | 243 | 0 | 100 | 0 | 1 | 243 | 16356 | 16598 | Mutant Pseudomonas putida isolate FELIX_MS547, complete genome | blastn | 24230 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 13074117 | 13074117 | PRJNA1192965_P_NODE_5191_length_241_cov_0.916667_g5172_i0 | PRJNA1192965 | 5191 | 241 | 0.916667 | 2.20916747 | Hydrogenophaga sp. NH-16 | 2184519 | Bacteria | Bacteria | 339 | 1.49e-88 | NTclustered | gi|1551376812|gb|CP029344.1| | 2184519 | g5172 | i0 | 92.083 | 73.448132780083 | 240 | 19 | 99 | 0 | 1 | 240 | 2868569 | 2868808 | Hydrogenophaga sp. NH-16 chromosome | blastn | 17701 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga sp. NH-16 | ||
| 13795742 | 13795742 | PRJNA1192965_P_NODE_1211_length_362_cov_3.892734_g1192_i0 | PRJNA1192965 | 1211 | 362 | 3.892734 | 14.09169708 | Methylophilus | 16 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g1192 | i0 | 100 | 122.737569060773 | 362 | 0 | 100 | 0 | 1 | 362 | 2986427 | 2986788 | Methylophilus methylotrophus strain D22 chromosome | blastn | 44431 | 669 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 13795743 | 13795743 | PRJNA1192965_P_NODE_1411_length_342_cov_1.144981_g1392_i0 | PRJNA1192965 | 1411 | 342 | 1.144981 | 3.91583502 | Pseudomonas | 286 | Bacteria | Bacteria | 632 | 9.079999999999999e-177 | NTclustered | gi|2623565045|gb|CP137621.1| | 303 | g1392 | i0 | 100 | 100.002923976608 | 342 | 0 | 100 | 0 | 1 | 342 | 4958930 | 4958589 | Pseudomonas putida strain 1.8.4 chromosome, complete genome | blastn | 34201 | 632 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 14349572 | 14349572 | PRJNA1192965_P_NODE_4152_length_246_cov_0.890173_g4133_i0 | PRJNA1192965 | 4152 | 246 | 0.890173 | 2.18982558 | uncultured Paracoccus sp. | 189685 | Bacteria | Bacteria | 442 | 1.1299999999999995e-119 | NTclustered | gi|375112072|gb|JQ071626.1| | 189685 | g4133 | i0 | 99.187 | 100.032520325203 | 246 | 0 | 100 | 1 | 1 | 246 | 252 | 9 | Uncultured Paracoccus sp. clone LL194 16S ribosomal RNA gene, partial sequence | blastn | 24608 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | uncultured Paracoccus sp. | ||
| 15070092 | 15070092 | PRJNA1192965_P_NODE_1872_length_308_cov_0.982979_g1853_i0 | PRJNA1192965 | 1872 | 308 | 0.982979 | 3.02757532 | Escherichia | 561 | Bacteria | Bacteria | 569 | 6.419999999999998e-158 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g1853 | i0 | 100 | 100 | 308 | 0 | 100 | 0 | 1 | 308 | 2305840 | 2306147 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 30800 | 569 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15070094 | 15070094 | PRJNA1192965_P_NODE_2632_length_272_cov_3.095477_g2613_i0 | PRJNA1192965 | 2632 | 272 | 3.095477 | 8.41969744 | Moraxellaceae | 468 | Bacteria | Bacteria | 503 | 5.729999999999998e-138 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g2613 | i0 | 100 | 337.823529411765 | 272 | 0 | 100 | 0 | 1 | 272 | 1496694 | 1496423 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 91888 | 503 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 15070099 | 15070099 | PRJNA1192965_P_NODE_3652_length_249_cov_0.875000_g3633_i0 | PRJNA1192965 | 3652 | 249 | 0.875 | 2.17875 | Pseudomonas | 286 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1774395784|gb|CP045767.1| | 2664899 | g3633 | i0 | 100 | 94.2650602409639 | 249 | 0 | 100 | 0 | 1 | 249 | 20067 | 19819 | Pseudomonas sp. CFSAN084952 chromosome, complete genome | blastn | 23472 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. CFSAN084952 | ||
| 15070100 | 15070100 | PRJNA1192965_P_NODE_4772_length_243_cov_0.905882_g4753_i0 | PRJNA1192965 | 4772 | 243 | 0.905882 | 2.20129326 | Escherichia | 561 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g4753 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 4421596 | 4421354 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15623281 | 15623281 | PRJNA1192965_P_NODE_1733_length_316_cov_1.148148_g1714_i0 | PRJNA1192965 | 1733 | 316 | 1.148148 | 3.62814768 | Methyloversatilis sp. RAC08 | 1842540 | Bacteria | Bacteria | 545 | 1.11e-150 | NTclustered | gi|1059487190|gb|CP016448.1| | 1842540 | g1714 | i0 | 97.785 | 233.70253164557 | 316 | 7 | 100 | 0 | 1 | 316 | 843462 | 843777 | Methyloversatilis sp. RAC08 chromosome, complete genome | blastn | 73850 | 545 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Methyloversatilis | Methyloversatilis sp. RAC08 | ||
| 16344906 | 16344906 | PRJNA1192965_P_NODE_1853_length_308_cov_2.221277_g1834_i0 | PRJNA1192965 | 1853 | 308 | 2.221277 | 6.84153316 | Methylophilus | 16 | Bacteria | Bacteria | 569 | 6.419999999999998e-158 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g1834 | i0 | 100 | 118.285714285714 | 308 | 0 | 100 | 0 | 1 | 308 | 2984309 | 2984002 | Methylophilus methylotrophus strain D22 chromosome | blastn | 36432 | 569 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 16344910 | 16344910 | PRJNA1192965_P_NODE_2653_length_272_cov_1.241206_g2634_i0 | PRJNA1192965 | 2653 | 272 | 1.241206 | 3.37608032 | Pseudomonas | 286 | Bacteria | Bacteria | 497 | 2.67e-136 | NTclustered | gi|1269271233|gb|CP023048.1| | 47880 | g2634 | i0 | 99.632 | 101.9375 | 272 | 1 | 100 | 0 | 1 | 272 | 4425860 | 4425589 | Pseudomonas fulva strain SB1 chromosome, complete genome | blastn | 27727 | 497 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fulva | ||
| 16344915 | 16344915 | PRJNA1192965_P_NODE_4313_length_245_cov_1.372093_g4294_i0 | PRJNA1192965 | 4313 | 245 | 1.372093 | 3.36162785 | Escherichia | 561 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4294 | i0 | 99.592 | 100 | 245 | 1 | 100 | 0 | 1 | 245 | 4368478 | 4368722 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24500 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16344916 | 16344916 | PRJNA1192965_P_NODE_4533_length_244_cov_0.900585_g4514_i0 | PRJNA1192965 | 4533 | 244 | 0.900585 | 2.1974274 | Delftia | 80865 | Bacteria | Bacteria | 429 | 8.699999999999998e-116 | NTclustered | gi|2638526057|gb|CP135236.1| | 180282 | g4514 | i0 | 98.361 | 98.577868852459 | 244 | 4 | 100 | 0 | 1 | 244 | 2474212 | 2474455 | Delftia tsuruhatensis strain HA60 chromosome, complete genome | blastn | 24053 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia tsuruhatensis | ||
| 16897635 | 16897635 | PRJNA1192965_P_NODE_4134_length_246_cov_0.890173_g4115_i0 | PRJNA1192965 | 4134 | 246 | 0.890173 | 2.18982558 | Acinetobacter sp. NyZ410 | 2929509 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2218583909|gb|CP094620.1| | 2929509 | g4115 | i0 | 100 | 10.4878048780488 | 246 | 0 | 100 | 0 | 1 | 246 | 4535117 | 4535362 | Acinetobacter sp. NyZ410 chromosome, complete genome | blastn | 2580 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. NyZ410 | ||
| 16897636 | 16897636 | PRJNA1192965_P_NODE_4154_length_246_cov_0.890173_g4135_i0 | PRJNA1192965 | 4154 | 246 | 0.890173 | 2.18982558 | Brevundimonas diminuta | 293 | Bacteria | Bacteria | 427 | 3.16e-115 | NTclustered | gi|2636576969|gb|CP140006.1| | 293 | g4135 | i0 | 97.967 | 10.9878048780488 | 246 | 5 | 100 | 0 | 1 | 246 | 2761821 | 2762066 | Brevundimonas diminuta strain HAMBI_0018 chromosome, complete genome | blastn | 2703 | 427 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas diminuta | ||
| 18172121 | 18172121 | PRJNA1192965_P_NODE_3595_length_250_cov_0.870056_g3576_i0 | PRJNA1192965 | 3595 | 250 | 0.870056 | 2.17514 | Undibacterium sp. YM2 | 2058625 | Bacteria | Bacteria | 440 | 4.1399999999999976e-119 | NTclustered | gi|1798099803|dbj|AP018441.1| | 2058625 | g3576 | i0 | 98.4 | 20.804 | 250 | 4 | 100 | 0 | 1 | 250 | 4417105 | 4416856 | Undibacterium sp. YM2 DNA, complete genome | blastn | 5201 | 440 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. YM2 | ||
| 18172126 | 18172126 | PRJNA1192965_P_NODE_4315_length_245_cov_0.895349_g4296_i0 | PRJNA1192965 | 4315 | 245 | 0.895349 | 2.19360505 | Variovorax sp. UC122_21 | 3374554 | Bacteria | Bacteria | 207 | 4.46e-49 | NTclustered | gi|2842938618|gb|CP172004.1| | 3374554 | g4296 | i0 | 85.222 | 12.4204081632653 | 203 | 28 | 82 | 2 | 23 | 224 | 6442596 | 6442395 | Variovorax sp. UC122_21 chromosome 1, complete sequence | blastn | 3043 | 207 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. UC122_21 | ||
| 18172128 | 18172128 | PRJNA1192965_P_NODE_4555_length_244_cov_0.900585_g4536_i0 | PRJNA1192965 | 4555 | 244 | 0.900585 | 2.1974274 | Acinetobacter lwoffii | 28090 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2072654753|gb|CP072549.1| | 28090 | g4536 | i0 | 100 | 96.2540983606557 | 244 | 0 | 100 | 0 | 1 | 244 | 2743489 | 2743732 | Acinetobacter lwoffii strain H7 chromosome, complete genome | blastn | 23486 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 18893844 | 18893844 | PRJNA1192965_P_NODE_2995_length_259_cov_2.483871_g2976_i0 | PRJNA1192965 | 2995 | 259 | 2.483871 | 6.43322589 | Acinetobacter | 469 | Bacteria | Bacteria | 479 | 9.13e-131 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g2976 | i0 | 100 | 685.992277992278 | 259 | 0 | 100 | 0 | 1 | 259 | 168057 | 167799 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 177672 | 479 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 19446542 | 19446542 | PRJNA1192965_P_NODE_3476_length_250_cov_0.870056_g3457_i0 | PRJNA1192965 | 3476 | 250 | 0.870056 | 2.17514 | Methylobacterium sp. 391_Methyba4 | 3038924 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2484084555|gb|CP121475.1| | 3038924 | g3457 | i0 | 100 | 54.24 | 250 | 0 | 100 | 0 | 1 | 250 | 4356938 | 4356689 | Methylobacterium sp. 391_Methyba4 chromosome, complete genome | blastn | 13560 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. 391_Methyba4 | ||
| 19446545 | 19446545 | PRJNA1192965_P_NODE_3816_length_248_cov_0.880000_g3797_i0 | PRJNA1192965 | 3816 | 248 | 0.88 | 2.1824 | Sphingomonas sp. MMS24-J45 | 3238806 | Bacteria | Bacteria | 213 | 9.72e-51 | NTclustered | gi|2851418772|gb|CP173255.1| | 3238806 | g3797 | i0 | 82.329 | 3.95967741935484 | 249 | 40 | 99 | 4 | 2 | 248 | 524022 | 524268 | Sphingomonas sp. MMS24-J45 chromosome, complete genome | blastn | 982 | 213 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. MMS24-J45 | ||
| 19446548 | 19446548 | PRJNA1192965_P_NODE_4056_length_247_cov_0.885057_g4037_i0 | PRJNA1192965 | 4056 | 247 | 0.885057 | 2.18609079 | Methylophilus methylotrophus | 17 | Bacteria | Bacteria | 429 | 8.83e-116 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g4037 | i0 | 97.976 | 2.08906882591093 | 247 | 5 | 100 | 0 | 1 | 247 | 204845 | 205091 | Methylophilus methylotrophus strain D22 chromosome | blastn | 516 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 20168654 | 20168654 | PRJNA1192965_P_NODE_2376_length_283_cov_1.309524_g2357_i0 | PRJNA1192965 | 2376 | 283 | 1.309524 | 3.70595292 | Gluconobacter | 441 | Bacteria | Bacteria | 518 | 2.14e-142 | NTclustered | gi|2543052881|gb|CP102494.1| | 442 | g2357 | i0 | 99.647 | 15.7243816254417 | 283 | 1 | 100 | 0 | 1 | 283 | 382673 | 382955 | Gluconobacter oxydans strain ATCC 9937 chromosome, complete genome | blastn | 4450 | 523 | 0.990439770554493 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Gluconobacter | Gluconobacter oxydans | ||
| 20168655 | 20168655 | PRJNA1192965_P_NODE_2516_length_277_cov_5.034314_g2497_i0 | PRJNA1192965 | 2516 | 277 | 5.034314 | 13.94504978 | Variovorax | 34072 | Bacteria | Bacteria | 484 | 2.1199999999999996e-132 | NTclustered | gi|2622025017|gb|CP138515.1| | 34073 | g2497 | i0 | 98.195 | 195.667870036101 | 277 | 5 | 100 | 0 | 1 | 277 | 5059582 | 5059306 | Variovorax paradoxus strain 2u118 chromosome, complete genome | blastn | 54200 | 484 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 20168657 | 20168657 | PRJNA1192965_P_NODE_4356_length_245_cov_0.895349_g4337_i0 | PRJNA1192965 | 4356 | 245 | 0.895349 | 2.19360505 | Variovorax | 34072 | Bacteria | Bacteria | 128 | 3.57e-25 | NTclustered | gi|2741137698|dbj|AP028659.1| | 3065952 | g4337 | i0 | 94.118 | 10.6285714285714 | 85 | 4 | 35 | 1 | 85 | 169 | 70328 | 70411 | Variovorax sp. V15 DNA, complete genome | blastn | 2604 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. V15 | ||
| 21997227 | 21997227 | PRJNA1192965_P_NODE_2758_length_268_cov_1.476923_g2739_i0 | PRJNA1192965 | 2758 | 268 | 1.476923 | 3.95815364 | Brevundimonas diminuta | 293 | Bacteria | Bacteria | 496 | 9.429999999999999e-136 | NTclustered | gi|1948646189|gb|CP066026.1| | 293 | g2739 | i0 | 100 | 8.20149253731343 | 268 | 0 | 100 | 0 | 1 | 268 | 625116 | 624849 | Brevundimonas diminuta strain FDAARGOS_1026 chromosome, complete genome | blastn | 2198 | 496 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas diminuta | ||
| 21997244 | 21997244 | PRJNA1192965_P_NODE_4998_length_242_cov_0.911243_g4979_i0 | PRJNA1192965 | 4998 | 242 | 0.911243 | 2.20520806 | Sphingomonas sp. HMP9 | 1517554 | Bacteria | Bacteria | 287 | 5.49e-73 | NTclustered | gi|1850108108|dbj|AP022673.1| | 1517554 | g4979 | i0 | 88.017 | 88.5867768595041 | 242 | 29 | 100 | 0 | 1 | 242 | 1331639 | 1331880 | Sphingomonas sp. HMP9 DNA, complete genome | blastn | 21438 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. HMP9 | ||
| 22719220 | 22719220 | PRJNA1192965_P_NODE_1478_length_336_cov_3.019011_g1459_i0 | PRJNA1192965 | 1478 | 336 | 3.019011 | 10.14387696 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 610 | 4.17e-170 | NTclustered | gi|2177868121|gb|CP061258.1| | 562 | g1459 | i0 | 99.405 | 681.122023809524 | 336 | 2 | 100 | 0 | 1 | 336 | 1217607 | 1217942 | Escherichia coli strain STEC1080 chromosome, complete genome | blastn | 228857 | 610 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22719221 | 22719221 | PRJNA1192965_P_NODE_1518_length_332_cov_6.540541_g1499_i0 | PRJNA1192965 | 1518 | 332 | 6.540541 | 21.71459612 | Pseudomonas | 286 | Bacteria | Bacteria | 614 | 3.1799999999999995e-171 | NTclustered | gi|2623565045|gb|CP137621.1| | 303 | g1499 | i0 | 100 | 101.069277108434 | 332 | 0 | 100 | 0 | 1 | 332 | 5194729 | 5194398 | Pseudomonas putida strain 1.8.4 chromosome, complete genome | blastn | 33555 | 614 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 22719224 | 22719224 | PRJNA1192965_P_NODE_2858_length_264_cov_1.277487_g2839_i0 | PRJNA1192965 | 2858 | 264 | 1.277487 | 3.37256568 | Serratia | 613 | Bacteria | Bacteria | 483 | 7.219999999999998e-132 | NTclustered | gi|1474587916|gb|CP027796.1| | 615 | g2839 | i0 | 99.621 | 100 | 264 | 1 | 100 | 0 | 1 | 264 | 3386006 | 3385743 | Serratia marcescens strain EL1 chromosome | blastn | 26400 | 483 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia marcescens | ||
| 22719227 | 22719227 | PRJNA1192965_P_NODE_4798_length_243_cov_0.905882_g4779_i0 | PRJNA1192965 | 4798 | 243 | 0.905882 | 2.20129326 | Pseudomonas | 286 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2063549408|gb|CP077082.1| | 2745519 | g4779 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 6137872 | 6137630 | Pseudomonas sp. OE 28.3 chromosome, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. OE 28.3 | ||
| 23994505 | 23994505 | PRJNA1192965_P_NODE_1639_length_322_cov_2.204819_g1620_i0 | PRJNA1192965 | 1639 | 322 | 2.204819 | 7.09951718 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 595 | 1.1099999999999995e-165 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1620 | i0 | 100 | 100 | 322 | 0 | 100 | 0 | 1 | 322 | 227692 | 228013 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 32200 | 595 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23994509 | 23994509 | PRJNA1192965_P_NODE_2699_length_270_cov_1.563452_g2680_i0 | PRJNA1192965 | 2699 | 270 | 1.563452 | 4.2213204 | Escherichia | 561 | Bacteria | Bacteria | 499 | 7.349999999999998e-137 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g2680 | i0 | 100 | 100 | 270 | 0 | 100 | 0 | 1 | 270 | 3882497 | 3882766 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 27000 | 499 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23994510 | 23994510 | PRJNA1192965_P_NODE_2739_length_268_cov_5.374359_g2720_i0 | PRJNA1192965 | 2739 | 268 | 5.374359 | 14.40328212 | root | 1 | Root_unresolved | Root_unresolved | 496 | 9.429999999999999e-136 | NTclustered | gi|1714595986|gb|MN249614.1| | 550 | g2720 | i0 | 100 | 232.555970149254 | 268 | 0 | 100 | 0 | 1 | 268 | 391 | 658 | Enterobacter cloacae strain 15B0D2-B1 16S ribosomal RNA gene, partial sequence | blastn | 62325 | 496 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 23994512 | 23994512 | PRJNA1192965_P_NODE_3139_length_255_cov_1.280220_g3120_i0 | PRJNA1192965 | 3139 | 255 | 1.28022 | 3.264561 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 472 | 1.5e-128 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3120 | i0 | 100 | 195.905882352941 | 255 | 0 | 100 | 0 | 1 | 255 | 994340 | 994594 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 49956 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23994513 | 23994513 | PRJNA1192965_P_NODE_3359_length_251_cov_0.865169_g3340_i0 | PRJNA1192965 | 3359 | 251 | 0.865169 | 2.17157419 | Brevundimonas | 41275 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2482347215|gb|CP116770.1| | 3021811 | g3340 | i0 | 100 | 21.0119521912351 | 251 | 0 | 100 | 0 | 1 | 251 | 1438253 | 1438503 | Brevundimonas sanguinis strain NCCP 15609 chromosome, complete genome | blastn | 5274 | 464 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas sanguinis | ||
| 24546548 | 24546548 | PRJNA1192965_P_NODE_1600_length_325_cov_2.722222_g1581_i0 | PRJNA1192965 | 1600 | 325 | 2.722222 | 8.8472215 | Sulfuriflexus mobilis | 1811807 | Bacteria | Bacteria | 75 | 6.52e-9 | NTclustered | gi|1496472134|dbj|AP018725.1| | 1811807 | g1581 | i0 | 86.957 | 0.212307692307692 | 69 | 6 | 20 | 1 | 8 | 73 | 1883938 | 1884006 | Sulfuriflexus mobilis aks1 DNA, complete genome | blastn | 69 | 75 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Granulosicoccaceae | Sulfuriflexus | Sulfuriflexus mobilis | ||
| 24546553 | 24546553 | PRJNA1192965_P_NODE_2460_length_280_cov_0.801932_g2441_i0 | PRJNA1192965 | 2460 | 280 | 0.801932 | 2.2454096 | Pseudomonas sp. LS1212 | 2972478 | Bacteria | Bacteria | 490 | 4.61e-134 | NTclustered | gi|2289356169|gb|CP102951.1| | 2972478 | g2441 | i0 | 98.221 | 609.842857142857 | 281 | 4 | 100 | 1 | 1 | 280 | 107599 | 107319 | Pseudomonas sp. LS1212 chromosome, complete genome | blastn | 170756 | 490 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. LS1212 | ||
| 24546569 | 24546569 | PRJNA1192965_P_NODE_5060_length_241_cov_1.583333_g5041_i0 | PRJNA1192965 | 5060 | 241 | 1.583333 | 3.8158325299999998 | Variovorax sp. Varisp41 | 3243033 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2897250188|gb|CP168541.1| | 3243033 | g5041 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 16 | 43 | 511405 | 511432 | Variovorax sp. Varisp41 strain CT11-41 chromosome 2, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. Varisp41 | ||
| 25268590 | 25268590 | PRJNA1192965_P_NODE_5160_length_241_cov_0.916667_g5141_i0 | PRJNA1192965 | 5160 | 241 | 0.916667 | 2.20916747 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 442 | 1.0999999999999999e-119 | NTclustered | gi|2578562951|gb|CP133989.1| | 583319 | g5141 | i0 | 100 | 99.7136929460581 | 239 | 0 | 99 | 0 | 1 | 239 | 2569449 | 2569687 | Stenotrophomonas sp. 9 chromosome, complete genome | blastn | 24031 | 446 | 0.991031390134529 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas sp. 9 | ||
| 25268591 | 25268591 | PRJNA1192965_P_NODE_600_length_481_cov_2.196078_g581_i0 | PRJNA1192965 | 600 | 481 | 2.196078 | 10.56313518 | Neisseriaceae | 481 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|1633799129|gb|CP039886.1| | 484 | g581 | i0 | 99.376 | 350.995841995842 | 481 | 3 | 100 | 0 | 1 | 481 | 126602 | 127082 | Neisseria flavescens strain ATCC 13120 chromosome, complete genome | blastn | 168829 | 878 | 0.993166287015945 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;