RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1192965" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1192965 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5423639 5423639 PRJNA1192965_P_NODE_2565_length_275_cov_1.524752_g2546_i0 PRJNA1192965 2565 275 1.524752 4.193068 Halteromyces radiatus 101107 Fungi Fungi 134 8.77e-27   NTclustered gi|2323726675|ref|XM_051542152.1| 101107 g2546 i0 87.719 10.7745454545455 114 14 41 0 36 149 611 498 Halteromyces radiatus 40S ribosomal protein S8 (BX664DRAFT_295451), partial mRNA blastn 2963 134 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
6698362 6698362 PRJNA1192965_P_NODE_2026_length_299_cov_1.362832_g2007_i0 PRJNA1192965 2026 299 1.362832 4.07486768 Umbelopsis ramanniana 41833 Fungi Fungi 206 2.02e-48   NTclustered gi|2323695283|ref|XM_051591449.1| 1314678 g2007 i0 85.354 17.2207357859532 198 29 66 0 6 203 145 342 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_256111), partial mRNA blastn 5149 206 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
16897637 16897637 PRJNA1192965_P_NODE_4194_length_246_cov_0.890173_g4175_i0 PRJNA1192965 4194 246 0.890173 2.18982558 Gamsiella multidivaricata 101098 Fungi Fungi 60.2 1.33e-4   NTclustered gi|2323811865|ref|XM_051558084.1| 101098 g4175 i0 97.143 0.142276422764228 35 1 14 0 203 237 575 541 Gamsiella multidivaricata 40s ribosomal protein S6 (BC939DRAFT_470120), mRNA blastn 35 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;