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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1192965" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2871287 2871287 PRJNA1192965_P_NODE_3723_length_249_cov_0.875000_g3704_i0 PRJNA1192965 3723 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 407 4.1799999999999994e-109   NTclustered gi|290998763|ref|XM_002681904.1| 5762 g3704 i0 96.356 1.74698795180723 247 9 99 0 3 249 730 484 Naegleria gruberi rab family small GTPase (NAEGRDRAFT_35122), mRNA blastn 435 407 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10524213 10524213 PRJNA1192965_P_NODE_4369_length_245_cov_0.895349_g4350_i0 PRJNA1192965 4369 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 353 5.41e-93   NTclustered gi|290998779|ref|XM_002681912.1| 5762 g4350 i0 92.653 1.98367346938776 245 18 100 0 1 245 1778 1534 Naegleria gruberi lysyl tRNA synthetase (NAEGRDRAFT_77219), mRNA blastn 486 353 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13074106 13074106 PRJNA1192965_P_NODE_3551_length_250_cov_0.870056_g3532_i0 PRJNA1192965 3551 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 158 4.66e-34   NTclustered gi|290977378|ref|XM_002671369.1| 5762 g3532 i0 78.656 1.012 253 43 98 7 1 246 473 721 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_73480), partial mRNA blastn 253 158 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14349557 14349557 PRJNA1192965_P_NODE_1532_length_331_cov_1.767442_g1513_i0 PRJNA1192965 1532 331 1.767442 5.85023302 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 265 3.68e-66   NTclustered gi|290975754|ref|XM_002670561.1| 5762 g1513 i0 82.166 1.86706948640483 314 50 94 5 3 314 333 24 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55912), mRNA blastn 618 265 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16897627 16897627 PRJNA1192965_P_NODE_2994_length_259_cov_2.483871_g2975_i0 PRJNA1192965 2994 259 2.483871 6.43322589 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 435 2e-117   NTclustered gi|4321711|gb|AF058284.1|AF058284 5764 g2975 i0 96.911 81.2007722007722 259 8 100 0 1 259 452 194 Naegleria andersoni elongation factor 1 alpha (tef2) gene, partial cds blastn 21031 435 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
19446538 19446538 PRJNA1192965_P_NODE_2836_length_265_cov_1.250000_g2817_i0 PRJNA1192965 2836 265 1.25 3.3125 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 231 2.9e-56   NTclustered gi|290992914|ref|XM_002679033.1| 5762 g2817 i0 86.893 0.777358490566038 206 27 78 0 60 265 58 263 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36109), partial mRNA blastn 206 231 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19446547 19446547 PRJNA1192965_P_NODE_3996_length_247_cov_0.885057_g3977_i0 PRJNA1192965 3996 247 0.885057 2.18609079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 340 4.25e-89   NTclustered gi|290981121|ref|XM_002673234.1| 5762 g3977 i0 91.498 1 247 21 100 0 1 247 276 30 Naegleria gruberi kynurenine 3-monooxygenase-like protein (NAEGRDRAFT_59052), partial mRNA blastn 247 340 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20721881 20721881 PRJNA1192965_P_NODE_4217_length_246_cov_0.890173_g4198_i0 PRJNA1192965 4217 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.65e-33   NTclustered gi|290997252|ref|XM_002681150.1| 5762 g4198 i0 78.313 20.8373983739837 249 48 100 6 1 246 1437 1192 Naegleria gruberi HSP70 family protein (NAEGRDRAFT_82977), mRNA blastn 5126 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;