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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1192965" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
320559 320559 PRJNA1192965_P_NODE_2081_length_296_cov_1.381166_g2062_i0 PRJNA1192965 2081 296 1.381166 4.08825136 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 394 3.96e-105   NTclustered gi|47175724|gb|AY617304.1| 94289 g2062 i0 90.816 65.722972972973 294 27 99 0 3 296 178 471 Sterkiella histriomuscorum clone UGC1O0001_L01_F genomic sequence blastn 19454 394 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
320564 320564 PRJNA1192965_P_NODE_281_length_669_cov_4.815436_g263_i0 PRJNA1192965 281 669 4.815436 32.21526684 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1086 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g263 i0 95.964 45.7130044843049 669 27 100 0 1 669 690 22 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30582 1086 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1595173 1595173 PRJNA1192965_P_NODE_82_length_1065_cov_6.269153_g72_i0 PRJNA1192965 82 1065 6.269153 66.76647945 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1646 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g72 i0 97.222 21.3380281690141 972 27 91 0 1 972 234 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 22725 1646 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2871279 2871279 PRJNA1192965_P_NODE_183_length_803_cov_2.636986_g169_i0 PRJNA1192965 183 803 2.636986 21.17499758 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1131 0   NTclustered gi|110645006|gb|DQ665938.1| 151077 g169 i0 95 54.8829389788294 720 36 90 0 84 803 792 73 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 44071 1131 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2871286 2871286 PRJNA1192965_P_NODE_363_length_595_cov_3.865900_g345_i0 PRJNA1192965 363 595 3.8659 23.002105 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 928 0   NTclustered gi|110277428|gb|DQ662856.1| 151077 g345 i0 94.79 84.8773109243698 595 31 100 0 1 595 1055 1649 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 50502 928 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
4870459 4870459 PRJNA1192965_P_NODE_1384_length_344_cov_2.273063_g1365_i0 PRJNA1192965 1384 344 2.273063 7.81933672 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 628 1.1799999999999997e-175   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g1365 i0 99.708 99.4883720930233 343 1 99 0 2 344 1546 1204 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 34224 628 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7420276 7420276 PRJNA1192965_P_NODE_1946_length_304_cov_1.333333_g1927_i0 PRJNA1192965 1946 304 1.333333 4.05333232 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 374 5.319999999999998e-99   NTclustered gi|21215206|gb|AF510205.1| 5947 g1927 i0 88.816 95.3421052631579 304 34 100 0 1 304 1279 976 Oxytricha granulifera beta-tubulin gene, complete cds blastn 28984 375 0.997333333333333 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha granulifera
9248445 9248445 PRJNA1192965_P_NODE_848_length_413_cov_4.085294_g829_i0 PRJNA1192965 848 413 4.085294 16.87226422 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 691 0   NTclustered gi|301014695|gb|GQ377692.1| 151077 g829 i0 96.852 58.9661016949153 413 13 100 0 1 413 435 23 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 24353 691 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10524215 10524215 PRJNA1192965_P_NODE_5249_length_237_cov_2.451220_g5230_i0 PRJNA1192965 5249 237 2.45122 5.8093914 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 438 1.4e-118   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g5230 i0 100 98.2278481012658 237 0 100 0 1 237 885 649 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 23280 438 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11799063 11799063 PRJNA1192965_P_NODE_10_length_1929_cov_3.641703_g7_i0 PRJNA1192965 10 1929 3.641703 70.24845087 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 1315 0   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g7 i0 81.423 63.4945567651633 1658 265 85 36 68 1702 1 1638 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 122481 1315 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
11799091 11799091 PRJNA1192965_P_NODE_4870_length_242_cov_1.366864_g4851_i0 PRJNA1192965 4870 242 1.366864 3.30781088 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 425 1.11e-114   NTclustered gi|110644972|gb|DQ665918.1| 151077 g4851 i0 98.347 92.9338842975207 242 4 100 0 1 242 412 653 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 22490 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14349563 14349563 PRJNA1192965_P_NODE_2892_length_263_cov_1.368421_g2873_i0 PRJNA1192965 2892 263 1.368421 3.59894723 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 392 1.25e-104   NTclustered gi|662862630|gb|KJ000270.1| 151077 g2873 i0 93.536 1 263 17 100 0 1 263 88 350 Chilodonella uncinata strain ATCC PRA-256 clone P7 protein kinase domain containing protein gene, partial cds; macronuclear blastn 263 392 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16897645 16897645 PRJNA1192965_P_NODE_4834_length_243_cov_0.905882_g4815_i0 PRJNA1192965 4834 243 0.905882 2.20129326 Opisthonecta henneguyi 6026 SAR_Eukaryotes SAR_Eukaryotes 355 1.49e-93   NTclustered gi|4063597|gb|AF056109.1| 6026 g4815 i0 93.004 47.156378600823 243 17 100 0 1 243 1219 977 Telotrochidium henneguyii translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 11459 355 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
19446550 19446550 PRJNA1192965_P_NODE_4156_length_246_cov_0.890173_g4137_i0 PRJNA1192965 4156 246 0.890173 2.18982558 Opisthonecta henneguyi 6026 SAR_Eukaryotes SAR_Eukaryotes 344 3.27e-90   NTclustered gi|4063597|gb|AF056109.1| 6026 g4137 i0 92.181 43.2764227642276 243 19 99 0 1 243 275 517 Telotrochidium henneguyii translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 10646 344 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
20721861 20721861 PRJNA1192965_P_NODE_1497_length_334_cov_1.850575_g1478_i0 PRJNA1192965 1497 334 1.850575 6.1809205 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 579 1.1699999999999997e-160   NTclustered gi|300521444|gb|GQ377690.1| 151077 g1478 i0 97.904 1 334 7 100 0 1 334 513 180 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 334 579 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21997218 21997218 PRJNA1192965_P_NODE_1258_length_357_cov_5.302817_g1239_i0 PRJNA1192965 1258 357 5.302817 18.93105669 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 641 1.5799999999999994e-179   NTclustered gi|300676714|gb|GQ377691.1| 151077 g1239 i0 99.157 47.1204481792717 356 3 99 0 1 356 23 378 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 16822 641 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23272674 23272674 PRJNA1192965_P_NODE_2019_length_299_cov_2.637168_g2000_i0 PRJNA1192965 2019 299 2.637168 7.88513232 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 553 6.25e-153   NTclustered gi|1202135013|gb|KY476314.1| 151077 g2000 i0 100 95.8160535117057 299 0 100 0 1 299 19 317 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 28649 553 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24546551 24546551 PRJNA1192965_P_NODE_2220_length_288_cov_9.948837_g2201_i0 PRJNA1192965 2220 288 9.948837 28.65265056 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 416 8.2e-112   NTclustered gi|110645063|gb|DQ665311.1| 151077 g2201 i0 97.154 80.0694444444444 246 7 85 0 43 288 1 246 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 23060 416 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24546572 24546572 PRJNA1192965_P_NODE_5260_length_236_cov_2.079755_g5241_i0 PRJNA1192965 5260 236 2.079755 4.9082218 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 115 2.66e-21   NTclustered gi|829192014|ref|XM_012799966.1| 312017 g5241 i0 88.421 1.77966101694915 95 11 40 0 48 142 125 219 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 420 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
25268587 25268587 PRJNA1192965_P_NODE_440_length_547_cov_1.352321_g422_i0 PRJNA1192965 440 547 1.352321 7.39719587 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 937 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g422 i0 97.619 67.0402193784278 546 13 99 0 1 546 364 909 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 36671 937 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;