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contig_metadata

35 rows where analysis = "blastn", bioproject = "PRJNA1192965" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 35 ✖

bioproject 1

  • PRJNA1192965 · 35 ✖

analysis 1

  • blastn · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
320570 320570 PRJNA1192965_P_NODE_3861_length_248_cov_0.880000_g3842_i0 PRJNA1192965 3861 248 0.88 2.1824 Phragmites australis 29695 Plants Plants 453 5.2600000000000005e-123   NTclustered gi|2649472193|ref|XM_062336367.1| 29695 g3842 i0 99.597 36.5846774193548 248 1 100 0 1 248 1248 1001 PREDICTED: Phragmites australis serine/threonine-protein kinase UCNL-like (LOC133895845), mRNA blastn 9073 453 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
320576 320576 PRJNA1192965_P_NODE_4821_length_243_cov_0.905882_g4802_i0 PRJNA1192965 4821 243 0.905882 2.20129326 Phragmites australis 29695 Plants Plants 438 1.4399999999999996e-118   NTclustered gi|2649553258|ref|XM_062376601.1| 29695 g4802 i0 99.177 88.3168724279835 243 2 100 0 1 243 1143 1385 PREDICTED: Phragmites australis L-ascorbate oxidase homolog (LOC133929843), mRNA blastn 21461 438 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
1595164 1595164 PRJNA1192965_P_NODE_3262_length_251_cov_1.365169_g3243_i0 PRJNA1192965 3262 251 1.365169 3.42657419 Oryza sativa 4530 Plants Plants 370 5.53e-98   NTclustered gi|32972840|dbj|AK062822.1| 39947 g3243 i0 93.548 0.98804780876494 248 16 99 0 4 251 283 36 Oryza sativa Japonica Group cDNA clone:001-107-F04, full insert sequence blastn 248 370 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
1595166 1595166 PRJNA1192965_P_NODE_4042_length_247_cov_0.885057_g4023_i0 PRJNA1192965 4042 247 0.885057 2.18609079 Phragmites australis 29695 Plants Plants 449 6.78e-122   NTclustered gi|2649488444|ref|XM_062350722.1| 29695 g4023 i0 99.593 41.1376518218623 246 1 99 0 1 246 1284 1529 PREDICTED: Phragmites australis probable sulfate transporter 3.5 (LOC133908617), mRNA blastn 10161 449 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
6698375 6698375 PRJNA1192965_P_NODE_4246_length_246_cov_0.890173_g4227_i0 PRJNA1192965 4246 246 0.890173 2.18982558 Zingiber officinale 94328 Plants Plants 62.1 3.69e-5   NTclustered gi|2069986514|ref|XM_042552608.1| 94328 g4227 i0 86.667 0.24390243902439 60 2 23 5 48 103 995 938 PREDICTED: Zingiber officinale histone-lysine N-methyltransferase ASHR2-like (LOC121997933), mRNA blastn 60 62.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Zingiberaceae Zingiber Zingiber officinale
7973788 7973788 PRJNA1192965_P_NODE_4447_length_245_cov_0.895349_g4428_i0 PRJNA1192965 4447 245 0.895349 2.19360505 Phragmites australis 29695 Plants Plants 414 2.45e-111   NTclustered gi|2649517269|ref|XM_062357644.1| 29695 g4428 i0 99.13 33.8285714285714 230 2 94 0 16 245 986 1215 PREDICTED: Phragmites australis probable UDP-glucosyl transferase 73B6 (LOC133914556), mRNA blastn 8288 414 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
8695395 8695395 PRJNA1192965_P_NODE_5187_length_241_cov_0.916667_g5168_i0 PRJNA1192965 5187 241 0.916667 2.20916747 Eukaryota 2759 Plants Plants 54.7 0.006   NTclustered gi|2123802751|ref|XM_044515447.1| 4565 g5168 i0 100 0.713692946058091 29 0 12 0 212 240 138 110 PREDICTED: Triticum aestivum uncharacterized LOC123093471 (LOC123093471), mRNA blastn 172 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
9248422 9248422 PRJNA1192965_P_NODE_2528_length_277_cov_1.485294_g2509_i0 PRJNA1192965 2528 277 1.485294 4.11426438 Hordeum vulgare 4513 Plants Plants 54.7 0.007   NTclustered gi|326507677|dbj|AK372034.1| 112509 g2509 i0 100 0.104693140794224 29 0 10 0 30 58 2 30 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2145F06 blastn 29 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
11799064 11799064 PRJNA1192965_P_NODE_1110_length_374_cov_2.152824_g1091_i0 PRJNA1192965 1110 374 2.152824 8.05156176 Phragmites australis 29695 Plants Plants 686 0   NTclustered gi|2649549109|ref|XM_062374423.1| 29695 g1091 i0 99.733 1.89304812834225 374 1 100 0 1 374 643 270 PREDICTED: Phragmites australis uncharacterized LOC133928182 (LOC133928182), mRNA blastn 708 686 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
11799074 11799074 PRJNA1192965_P_NODE_1910_length_305_cov_4.663793_g1891_i0 PRJNA1192965 1910 305 4.663793 14.22456865 Hordeum vulgare 4513 Plants Plants 265 3.3499999999999997e-66   NTclustered gi|326517275|dbj|AK368801.1| 112509 g1891 i0 82.524 68.6459016393443 309 46 100 7 1 305 29 333 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2080A21 blastn 20937 265 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
11799088 11799088 PRJNA1192965_P_NODE_4370_length_245_cov_0.895349_g4351_i0 PRJNA1192965 4370 245 0.895349 2.19360505 Oryza sativa 4530 Plants Plants 453 5.1900000000000006e-123   NTclustered gi|38567776|emb|BX842608.1| 39947 g4351 i0 100 5.46122448979592 245 0 100 0 1 245 117090 116846 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence blastn 1338 453 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
11799097 11799097 PRJNA1192965_P_NODE_610_length_478_cov_3.041975_g591_i0 PRJNA1192965 610 478 3.041975 14.5406405 Lolium rigidum 89674 Plants Plants 93.5 2.74e-14   NTclustered gi|2212522013|ref|XM_047188977.1| 89674 g591 i0 76.374 3.21966527196653 182 37 38 5 198 379 495 670 PREDICTED: Lolium rigidum glycine-rich protein 2-like (LOC124649323), transcript variant X3, mRNA blastn 1539 93.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium rigidum
13074100 13074100 PRJNA1192965_P_NODE_2731_length_269_cov_1.178571_g2712_i0 PRJNA1192965 2731 269 1.178571 3.17035599 Phragmites australis 29695 Plants Plants 475 1.2299999999999999e-129   NTclustered gi|2649445758|ref|XM_062323204.1| 29695 g2712 i0 98.513 1 269 4 100 0 1 269 170 438 PREDICTED: Phragmites australis classical arabinogalactan protein 11-like (LOC133883766), mRNA blastn 269 475 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
13795744 13795744 PRJNA1192965_P_NODE_1871_length_308_cov_0.982979_g1852_i0 PRJNA1192965 1871 308 0.982979 3.02757532 Poaceae 4479 Plants Plants 252 2.64e-62   NTclustered gi|238008089|gb|BT084727.1| 4577 g1852 i0 88.942 18.5844155844156 208 18 66 4 105 308 2748 2542 Zea mays full-length cDNA clone ZM_BFb0167J19 mRNA, complete cds blastn 5724 252 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
14349580 14349580 PRJNA1192965_P_NODE_72_length_1102_cov_3.586978_g63_i0 PRJNA1192965 72 1102 3.5869780000000002 39.52849756 Oryza sativa 4530 Plants Plants 996 0   NTclustered gi|116641411|emb|CT836953.1| 39946 g63 i0 83.228 48.2223230490018 1103 167 99 16 9 1102 1119 26 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114K09, full insert sequence blastn 53141 996 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
15070102 15070102 PRJNA1192965_P_NODE_5332_length_226_cov_2.549020_g5313_i0 PRJNA1192965 5332 226 2.54902 5.7607852 Rosaceae 3745 Plants Plants 412 8.01e-111   NTclustered gi|2810943367|gb|CP168765.1| 3750 g5313 i0 100 101.641592920354 223 0 99 0 4 226 35403 35181 Malus domestica cultivar Golden Delicious chromosome 01 blastn 22971 412 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus domestica
15623305 15623305 PRJNA1192965_P_NODE_713_length_446_cov_1.316354_g694_i0 PRJNA1192965 713 446 1.316354 5.87093884 Oryza sativa 4530 Plants Plants 719 0   NTclustered gi|32971027|dbj|AK061009.1| 39947 g694 i0 95.74 140.670403587444 446 19 100 0 1 446 623 1068 Oryza sativa Japonica Group cDNA clone:006-204-A10, full insert sequence blastn 62739 719 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
16897623 16897623 PRJNA1192965_P_NODE_1974_length_302_cov_1.519651_g1955_i0 PRJNA1192965 1974 302 1.519651 4.58934602 Phragmites australis 29695 Plants Plants 547 2.9399999999999987e-151   NTclustered gi|2649458685|ref|XM_062329727.1| 29695 g1955 i0 99.338 28.5298013245033 302 2 100 0 1 302 158 459 PREDICTED: Phragmites australis pollen-specific protein C13-like (LOC133889232), mRNA blastn 8616 547 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
16897625 16897625 PRJNA1192965_P_NODE_2594_length_274_cov_1.343284_g2575_i0 PRJNA1192965 2594 274 1.343284 3.68059816 Hordeum vulgare 4513 Plants Plants 448 2.7499999999999993e-121   NTclustered gi|326507517|dbj|AK371954.1| 112509 g2575 i0 96.324 3.33211678832117 272 10 99 0 3 274 19 290 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2143N22 blastn 913 448 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
16897646 16897646 PRJNA1192965_P_NODE_4934_length_242_cov_0.911243_g4915_i0 PRJNA1192965 4934 242 0.911243 2.20520806 Phragmites australis 29695 Plants Plants 448 2.3799999999999995e-121   NTclustered gi|2649485783|ref|XM_062340786.1| 29695 g4915 i0 100 21.8553719008264 242 0 100 0 1 242 456 697 PREDICTED: Phragmites australis F-box protein At2g32560-like (LOC133899725), transcript variant X2, mRNA blastn 5289 448 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
18172109 18172109 PRJNA1192965_P_NODE_1275_length_356_cov_1.530035_g1256_i0 PRJNA1192965 1275 356 1.530035 5.4469246 Oryza sativa 4530 Plants Plants 278 5.11e-70   NTclustered gi|32995653|dbj|AK110444.1| 39947 g1256 i0 82.121 2.72752808988764 330 53 92 6 2 328 1111 1437 Oryza sativa Japonica Group cDNA clone:002-166-D10, full insert sequence blastn 971 278 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
18172119 18172119 PRJNA1192965_P_NODE_2675_length_271_cov_1.449495_g2656_i0 PRJNA1192965 2675 271 1.449495 3.92813145 Nymphaea colorata 210225 Plants Plants 52.8 0.025   NTclustered gi|1750922580|emb|LR722228.1| 210225 g2656 i0 100 0.103321033210332 28 0 10 0 80 107 23036 23009 XXX blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Nymphaeales Nymphaeaceae Nymphaea Nymphaea colorata
19446563 19446563 PRJNA1192965_P_NODE_96_length_1029_cov_3.326360_g86_i0 PRJNA1192965 96 1029 3.32636 34.2282444 Oryza sativa 4530 Plants Plants 357 1.98e-93   NTclustered gi|116640875|emb|CT836618.1| 39946 g86 i0 73.658 0.977648202137998 1006 229 96 31 30 1020 1011 27 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102M08, full insert sequence blastn 1006 357 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
20721864 20721864 PRJNA1192965_P_NODE_1777_length_313_cov_5.116667_g1758_i0 PRJNA1192965 1777 313 5.116667 16.01516771 Hordeum vulgare 4513 Plants Plants 257 5.78e-64   NTclustered gi|326517275|dbj|AK368801.1| 112509 g1758 i0 84.644 64.2747603833866 267 32 83 8 52 312 66 329 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2080A21 blastn 20118 257 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
20721870 20721870 PRJNA1192965_P_NODE_2457_length_280_cov_0.980676_g2438_i0 PRJNA1192965 2457 280 0.980676 2.7458928 Oryza sativa 4530 Plants Plants 449 7.830000000000001e-122   NTclustered gi|32971027|dbj|AK061009.1| 39947 g2438 i0 95.699 65.9642857142857 279 12 99 0 2 280 1409 1131 Oryza sativa Japonica Group cDNA clone:006-204-A10, full insert sequence blastn 18470 449 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
20721873 20721873 PRJNA1192965_P_NODE_3197_length_253_cov_1.100000_g3178_i0 PRJNA1192965 3197 253 1.1 2.783 Malus sylvestris 3752 Plants Plants 468 1.92e-127   NTclustered gi|2289489328|ref|XR_007614507.1| 3752 g3178 i0 100 113 253 0 100 0 1 253 315 63 PREDICTED: Malus sylvestris 28S ribosomal RNA (LOC126598001), rRNA blastn 28589 468 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus sylvestris
20721884 20721884 PRJNA1192965_P_NODE_4537_length_244_cov_0.900585_g4518_i0 PRJNA1192965 4537 244 0.900585 2.1974274 Oryza sativa 4530 Plants Plants 451 1.86e-122   NTclustered gi|32991771|dbj|AK106562.1| 39947 g4518 i0 100 5.60655737704918 244 0 100 0 1 244 1738 1981 Oryza sativa Japonica Group cDNA clone:002-110-C07, full insert sequence blastn 1368 451 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
21997222 21997222 PRJNA1192965_P_NODE_1918_length_305_cov_2.392241_g1899_i0 PRJNA1192965 1918 305 2.392241 7.29633505 Phragmites australis 29695 Plants Plants 564 2.95e-156   NTclustered gi|2649530328|ref|XM_062364611.1| 29695 g1899 i0 100 50.4491803278689 305 0 100 0 1 305 2893 2589 PREDICTED: Phragmites australis ATPase 8, plasma membrane-type-like (LOC133919999), mRNA blastn 15387 564 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
21997229 21997229 PRJNA1192965_P_NODE_3098_length_256_cov_1.683060_g3079_i0 PRJNA1192965 3098 256 1.68306 4.3086336 Zingiber officinale 94328 Plants Plants 152 2.2299999999999998e-32   NTclustered gi|2069868957|ref|XM_042598206.1| 94328 g3079 i0 86.62 48.15625 142 13 54 6 25 163 631 769 PREDICTED: Zingiber officinale 60S ribosomal protein L8-1-like (LOC122038450), mRNA blastn 12328 152 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Zingiberaceae Zingiber Zingiber officinale
21997235 21997235 PRJNA1192965_P_NODE_3838_length_248_cov_0.880000_g3819_i0 PRJNA1192965 3838 248 0.88 2.1824 Phragmites australis 29695 Plants Plants 431 2.47e-116   NTclustered gi|2649472193|ref|XM_062336367.1| 29695 g3819 i0 97.984 48.1895161290323 248 5 100 0 1 248 477 724 PREDICTED: Phragmites australis serine/threonine-protein kinase UCNL-like (LOC133895845), mRNA blastn 11951 431 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
21997240 21997240 PRJNA1192965_P_NODE_4438_length_245_cov_0.895349_g4419_i0 PRJNA1192965 4438 245 0.895349 2.19360505 Selaginella moellendorffii 88036 Plants Plants 52.8 0.022   NTclustered gi|1376947352|ref|XM_002979193.2| 88036 g4419 i0 100 0.114285714285714 28 0 11 0 49 76 983 956 PREDICTED: Selaginella moellendorffii trihelix transcription factor ASIL2 (LOC9634108), mRNA blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Selaginellales Selaginellaceae Selaginella Selaginella moellendorffii
23272667 23272667 PRJNA1192965_P_NODE_1159_length_369_cov_2.993243_g1140_i0 PRJNA1192965 1159 369 2.993243 11.04506667 Oryza sativa 4530 Plants Plants 250 1.16e-61   NTclustered gi|116641420|emb|CT836962.1| 39946 g1140 i0 79.357 71.3333333333333 373 63 100 9 1 369 385 23 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA211B12, full insert sequence blastn 26322 250 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
24546552 24546552 PRJNA1192965_P_NODE_2440_length_280_cov_1.710145_g2421_i0 PRJNA1192965 2440 280 1.710145 4.788406 Phragmites australis 29695 Plants Plants 490 4.61e-134   NTclustered gi|2649553258|ref|XM_062376601.1| 29695 g2421 i0 98.214 45.5285714285714 280 5 100 0 1 280 886 607 PREDICTED: Phragmites australis L-ascorbate oxidase homolog (LOC133929843), mRNA blastn 12748 490 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
24546558 24546558 PRJNA1192965_P_NODE_3460_length_250_cov_0.870056_g3441_i0 PRJNA1192965 3460 250 0.870056 2.17514 Hordeum vulgare 4513 Plants Plants 206 1.6399999999999998e-48   NTclustered gi|326497356|dbj|AK371065.1| 112509 g3441 i0 83.636 0.88 220 35 88 1 1 220 303 85 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2123O06 blastn 220 206 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
24546576 24546576 PRJNA1192965_P_NODE_820_length_419_cov_7.531792_g801_i0 PRJNA1192965 820 419 7.531792 31.55820848 Oryza sativa 4530 Plants Plants 597 4.1299999999999986e-166   NTclustered gi|116641420|emb|CT836962.1| 39946 g801 i0 92.381 5.39856801909308 420 30 100 2 1 419 23 441 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA211B12, full insert sequence blastn 2262 597 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;