RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1188114" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1188114 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1594733 1594733 PRJNA1188114_P_NODE_822_length_478_cov_4.785548_g770_i0 PRJNA1188114 822 478 4.785548 22.87491944 Aplysia californica 6500 Mollusca Mollusca 294 7.000000000000001e-75   NTclustered gi|1897919841|ref|XM_013080763.2| 6500 g770 i0 79.111 89.8054393305439 450 76 92 17 25 465 62 502 PREDICTED: Aplysia californica 40S ribosomal protein S18 (LOC101863011), mRNA blastn 42927 294 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
9247848 9247848 PRJNA1188114_P_NODE_1068_length_418_cov_2.168022_g1016_i0 PRJNA1188114 1068 418 2.168022 9.06233196 Pomacea canaliculata 400727 Mollusca Mollusca 89.8 3.07e-13   NTclustered gi|1397659794|ref|XM_025226100.1| 400727 g1016 i0 86.747 5.61004784688995 83 8 20 2 87 169 855 776 PREDICTED: Pomacea canaliculata skin secretory protein xP2-like (LOC112556759), mRNA blastn 2345 89.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
15069778 15069778 PRJNA1188114_P_NODE_11792_length_168_cov_1.285714_g11740_i0 PRJNA1188114 11792 168 1.285714 2.15999952 Metazoa 33208 Mollusca Mollusca 104 3.84e-18   NTclustered gi|1897920673|ref|XM_005095879.3| 6500 g11740 i0 92.958 3.70833333333333 71 5 42 0 64 134 818 748 PREDICTED: Aplysia californica ras-related protein Rab-7a (LOC101862261), transcript variant X1, mRNA blastn 623 104 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
19446051 19446051 PRJNA1188114_P_NODE_3656_length_230_cov_1.127072_g3604_i0 PRJNA1188114 3656 230 1.127072 2.5922656 Octopus bimaculoides 37653 Mollusca Mollusca 58.4 4.41e-4   NTclustered gi|2427251553|ref|XM_052969724.1| 37653 g3604 i0 100 1.25652173913043 31 0 13 0 23 53 2942 2912 PREDICTED: Octopus bimaculoides transcription factor mef2A (LOC106870467), mRNA blastn 289 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;